Motion regressors

[thomas.nickson]

Hey All,

I noticed there is no fsl_motion_outliers hook in nipype. Are there still ways of calculating the motion regressors that I can use in an FSL pipeline or are there other ways of doing this in Nipype?

Thanks,

Tom

[Satrajit Ghosh]

hi tom,

we normally use ArtifactDetect from nipype.algorithms.rapidart. 

the output from this can be fed into the model specification routines to generate appropriate regressors in the design matrix.

cheers,

satra

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[Arman Eshaghi]

or to wrap it as a Nipype interface on yourself and perhaps contribute to the whole project:

http://nipy.sourceforge.net/nipype/devel/cmd_interface_devel.html

All the best,
Arman