A very nice, complete and user-friendly tool for processing of shotgun metagenomic data. Even if something is unclear to a novel user of the pipeline, the developers are quick to respond and help out with whatever issue.
I also actually had a question (I posted it some weeks ago, but not sure if you had seen it). Would it be possible to have an updated IGC database with annotations from eggNOG mapper v2 (as I am also interested in e.g. CAZy, which is not annotated yet in the current IGC version)? It would be really greatly appreciated if that'd be possible!
Leiden University Medical Center, Department of Medical Microbiology
Op donderdag 19 november 2020 om 08:30:45 UTC+1 schreef mette Joergensen: