nextflow kuberun is running into errors

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Shiv P

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Jun 10, 2022, 6:08:03 PM6/10/22
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Hi All,

I've been trying to run nextflow on a kubernetes cluster which has a File storage mounted. I'm running into permission issues and I'm not able to find a resolution for this. It would be great if you could help/suggest me with anything. Thanks in advance for your help.

Command used: 
nextflow kuberun epi2me-labs/wf-human-sv --fastq /mnt/nfstore/ONTuserdata --out_dir /mnt/nfstore/analysis --reference /mnt/nfstore/reference/human_g1k_v37.fasta --sample HG0002_Gtube -v oke-fsspvc:/mnt/nfstore

Screen Shot 2022-06-10 at 2.48.23 PM.png
The error I'm getting is 
Command wrapper:
touch: cannot touch '.command.begin': Permission denied
.command.run: line 259: .exitcode: Permission denied

I have also attached .command.run file. It would be great if you could point me in the right direction. Thank you.

nf_command_run.txt
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