Hi All,
I've been trying to run nextflow on a kubernetes cluster which has a File storage mounted. I'm running into permission issues and I'm not able to find a resolution for this. It would be great if you could help/suggest me with anything. Thanks in advance for your help.
Command used:
nextflow kuberun epi2me-labs/wf-human-sv --fastq /mnt/nfstore/ONTuserdata --out_dir /mnt/nfstore/analysis --reference /mnt/nfstore/reference/human_g1k_v37.fasta --sample HG0002_Gtube -v oke-fsspvc:/mnt/nfstore
The error I'm getting is
Command wrapper:
touch: cannot touch '.command.begin': Permission denied
.command.run: line 259: .exitcode: Permission denied
I have also attached .command.run file. It would be great if you could point me in the right direction. Thank you.