The exit status of the task that caused the workflow execution to fail was: 255 Error executing process > 'featureCounts

[Kevin Guan]

Hello, 

I received this error: 

The exit status of the task that caused the workflow execution to fail was: 255

Error executing process > 'featureCounts(file_name)'

Command output: (empty) Command error: || Total alignments : 26906819 || || Successfully assigned alignments : 19733260 (73.3%) || || Running time : 1.79 minutes || || || || || || Summary of counting results can be found in file  [file_name]

[drhp...@gmail.com]

Hi Kevin,

This could happen for a number of reasons and is quite difficult to debug from the snippet you sent.

Please can you send the ".nextflow.log" file as well as the full error message printed to terminal please (you can redact paths if you wish)? If you have some code you can point to on Github that will help too.

Cheers,

Harshil