memory specification with slurm AWS
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sam benneti
May 3, 2022, 6:04:25 PM5/3/22
to Nextflow
Hello to all,
I've been working for a few days on an HPC infrastructure on AWS with slurm. I tried to deploy a nextflow pipeline but I realize that slurm does not like the memory specification and I have this error => sbatch: error: Memory specification can not be satisfied
anyone have an idea how to fix it on nextflow?
it seems that AWS ParallelCluster + slurm does not match with nextflow and does not accept the memory specification
Translated with www.DeepL.com/Translator (free version)
I've been working for a few days on an HPC infrastructure on AWS with slurm. I tried to deploy a nextflow pipeline but I realize that slurm does not like the memory specification and I have this error => sbatch: error: Memory specification can not be satisfied
anyone have an idea how to fix it on nextflow?
it seems that AWS ParallelCluster + slurm does not match with nextflow and does not accept the memory specification
Translated with www.DeepL.com/Translator (free version)
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