Neuroglancer

Hi, I have built neuroglancer with npm run build I can visualize precomptuted image and segmentation,

Hi, I would like to know if there are ways to rotate individual planes from a cross-section ? Here

sorry Jeremy, this took me years to answer. this is helpful! and I did not figure it out at that time

You can check webglreport.com to see if WebGL2 is supported. I don't have any specific advice

Neuroglancer supports ome-zarr metadata, and allows the "old" 0.4 metadata in zarr v3 as

There is now special support for Colab, using the `proxyPort` mechanism provided by colab. It should

Note, the error I receive is: AttributeError: 'list' object has no attribute 'rank'

Just posted there, thanks Ecks! On Thursday, July 28, 2022 at 9:58:33 PM UTC-7 Ecks Gee wrote: You

Hello, I am not able to move annotations using alt+mousedown0 on a linux machine with a mouse. I have

thank you for your responses. I tried but my data is about 500mb. so could not worked for me. Can I

Hello, after some months of development, we managed to do the following things: decouple the server

I have already got the precomputed file whose name is 04a.shared data. How can i load it in the

Hi, I have problems loading this NiFTI file into Neuroglancer. When I attempt to load, Neuroglancer

Hi Peter, Thanks for reporting this. Turns out this was a bug that I introduced recently in

To avoid deadlock, use the viewer.defer_callback method or run longer running computations on a

I have just pushed some significant updates to the Neuroglancer user interface related to side panels

Hi, we are trying to render the meshes of cells with their corresponding organelles. The ultimate

What Neuroglancer displays, including the datasources, and any other options, is controlled by its

Thank you for the mesh examples. What I am trying to do is pass directly the bytes of our precomputed

Thank you for your answer. The segment_query is doing what I wanted. I modified the get_skeleton as

It turns out example_skeleton.py had become broken. I fixed it. Currently the Python API can auto-

Wow, since Jan 9. You might have better luck asking the question on NG github? AFAIK, in the global

You can use npm run build-min to build a minified version then copy the contents of dist/min to a web

Great to know. Thank you! On Wednesday, June 10, 2020 at 8:33:36 PM UTC-4, Jeremy Maitin-Shepard

There is no UI for it, but you can set the "segmentColors" layer property to an object that

I have a list of data coordinates to turn into stand-alone annotations (collections of points and

I believe that is correct. However, I think you can use other tools from the seung-lab, like igneous,

If you want to use oauth or something similar, then you can model it on the brainmaps datasource. On

To generate meshes with more detail, you can try LocalVolume(..., mesh_options=dict(

VTK is supported as in the example you showed, but it cannot be added through the UI. Instead, you