NetPyNE v1.0.0 has been released

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Joe Graham

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May 13, 2021, 8:45:58 AM5/13/21
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NetPyNE v1.0.0 is now available.

For a complete list of changes and bug fixes see: https://github.com/Neurosim-lab/netpyne/releases/tag/v1.0.0

See here for instructions to install or update to the latest version: http://www.netpyne.org/install.html

New features

- Added wrapper for distributed saving; can now simply replace 'sim.gatherData()' with 'sim.gatherDataFromNodes()'

- Added distributed saving/loading ability (save/load data by MPI node)

- Allowed to specify 'cellModel' and point neuron params in netParams.cellParams (not only in netParams.popParams)

- Added cellsVisualizationSpacingMultiplier property to netParams

- Improved Granger plot, renamed it plotGranger

- Added interactive Granger plot (iplotGranger)

- Implemented testing in GitHub Actions with pytest (thanks Daniel!)

- Improved sim.clearAll such that it works even before a sim is run

- Properly formatted all module docstrings

Bug fixes

- Fixed bug in TupleToStr function

- Fixed broken links in tutorials

- Bokeh update required changing options from None to 'auto'
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