Hi Vivek,
for one, based on the place of the crash, I believe there must be a problem in your transAPI module, since neither netopeer nor libnetconf use libaugeas. Namespaces seems fine even in the ncclient RPC, but the target datastore is different. The strange thing is the message-id used by ncclient, although I don't think it should cause any problems. Another weird thing is that it modifies the candidate datastore, which should not trigger any callbacks, but simply change the candidate datastore. Still, I don't think I can help you, because there is not a way for me to reproduce your problem.
Regards,
Michal