I was expecting to see something similar to a sinewave with the bottom-half chopped-off, and the peaks limited to 5V. This looks more like a sinewave, so that's a suspect and could explain why you dont get anything at pin 6.
Have you tried placing a resistor, something between 10K to 100K, from pin 5 to GND ? This may help pull-down the signal to GND and give it a better shape. Lower values should give a better shape, but if they are too low, the amplitude will degrade.