introduction

[mmil...@gmail.com]

hi all,

i've worked with graph databases and i've worked in biology, so this group seemed like a natural.  i've been involved in many standards efforts, currently involved in the GA4GH efforts.

cheers,
michael

[madhuri gota]

Hello Michael !

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[Michael Hunger]

Welcome Michael,

unfortunately this group is quieter that I would love it to be.

If any of you have ideas on how we can encourage everyone to share research / questions / projects, I'd be all ears.

Cheers, Michael

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[Maximilian Lombardo]

I guess I'll make an introduction here as well...

Just joined the group recently, I have a background in biotech, drug discovery, machine learning and other computational stuff. Currently working at a biotech startup. I just got interested in graph databases and their applications and am hoping to learn from this community.

Here is a video I have watched recently on novartis' efforts towards data integration using neo4j

https://www.youtube.com/watch?v=mrK7DpGfGDg

Cheers,

Max

On Monday, June 18, 2018 at 11:23:13 AM UTC-4, Michael Hunger wrote:

Welcome Michael,

unfortunately this group is quieter that I would love it to be.

If any of you have ideas on how we can encourage everyone to share research / questions / projects, I'd be all ears.

Cheers, Michael

On Sat, Jun 16, 2018 at 6:39 PM, <mmil...@gmail.com> wrote:

hi all,

i've worked with graph databases and i've worked in biology, so this group seemed like a natural.  i've been involved in many standards efforts, currently involved in the GA4GH efforts.

cheers,
michael

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[Sandra]

Hi, 

at my group we are using neo4j to map different compounds and reaction databases and metabolic models. It is not an easy task. We would like to include also sequence data but it would make it to grow too much.

Cheers,

Sandra Castillo

On Mon, Jun 18, 2018, 6:23 PM 'Michael Hunger' via neo4j-biotech <neo4j-...@googlegroups.com> wrote:

Welcome Michael,

unfortunately this group is quieter that I would love it to be.

If any of you have ideas on how we can encourage everyone to share research / questions / projects, I'd be all ears.

Cheers, Michael

On Sat, Jun 16, 2018 at 6:39 PM, <mmil...@gmail.com> wrote:

hi all,

i've worked with graph databases and i've worked in biology, so this group seemed like a natural.  i've been involved in many standards efforts, currently involved in the GA4GH efforts.

cheers,
michael

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[Michael Hunger]

Welcome all.

If you're interested these articles / presentations could be helpful for you.

If you have questions please ask any time.

* Proceedings, Neo4j Life Sciences Workshop: https://neo4j.com/blog/neo4j-life-sciences-healthcare-workshop-berlin/

* Neo4j in Life Sciences, Projects, Papers and more: https://neo4j.com/developer/life-sciences-and-healthcare/

* Presentation: "Accelerating Scientific Research through Machine Learning and Graphs": https://neo4j.com/blog/scientific-research-machine-learning-graphs/

* This Week in Neo4j with life science focus: https://neo4j.com/blog/this-week-neo4j-24-june-2017/

* Video, Thilo Muth: "Proteonomics" https://vimeo.com/77450061

* Daniel Himmelstein, Hetionet: https://www.youtube.com/watch?v=jwhAlNgjvMA

* Simon Jupp, Importing Life Science Data into Neo4j: https://www.slideshare.net/thesimonjupp/importing-life-science-at-a-into-neo4j

Cheers, Michael

On Mon, Jun 18, 2018 at 5:33 PM, Sandra <nol...@gmail.com> wrote:

Hi, 

at my group we are using neo4j to map different compounds and reaction databases and metabolic models. It is not an easy task. We would like to include also sequence data but it would make it to grow too much.

Cheers,

Sandra Castillo

On Mon, Jun 18, 2018, 6:23 PM 'Michael Hunger' via neo4j-biotech <neo4j-biotech@googlegroups.com> wrote:

Welcome Michael,

unfortunately this group is quieter that I would love it to be.

If any of you have ideas on how we can encourage everyone to share research / questions / projects, I'd be all ears.

Cheers, Michael

On Sat, Jun 16, 2018 at 6:39 PM, <mmil...@gmail.com> wrote:

hi all,

i've worked with graph databases and i've worked in biology, so this group seemed like a natural.  i've been involved in many standards efforts, currently involved in the GA4GH efforts.

cheers,
michael

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[Martin Preusse]

Nice to see more people here.

During my PhD at https://www.helmholtz-muenchen.de/icb/ I started working with neo4j to integrate microRNA regulation data.

We are working on a spin-off company based on data integration with neo4j: https://www.knowing-health.com/ and https://twitter.com/knowing_health

Would be nice to get more info about your work/company/research groups!

Martin

[Andre Selmer]

Hi, 

I suppose I should stop lurking as well :) I am working on working on a multi-study site based on Neo4J that allows for the standardization and controlled sharing of data-sets, currently it is focused more neurological research (from a psychological perspective).

Cheers

Andre

[Michael Hunger]

Hi All,

it would be cool if you could add links to your projects / publications / code / datasets :)

So that others can have a look and we can also collect them in one place.

Cheers, Michael

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