nctoolbox in ubuntu 13.10

[Abdoulaye Sy]

how do i configure nctoolbox on matlab r2009a in ubuntu 13.10

[Rich Signell]

Abdoulaye,

Just follow the "installation" link on this page:
http://code.google.com/p/nctoolbox/

There is nothing special about ubuntu 13.10. 
That's the nice thing about NCTOOLBOX. 
It's just java + matlab, so it's the same on all systems -- no mex files required!

-Rich

[Richard Signell]

Oops. I gave the old Google Code link by mistake.
We have moved to github, so please use this installation link instead:

https://github.com/nctoolbox/nctoolbox/wiki/Installation

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Rich Signell
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Falmouth, MA

[Abdoulaye Sy]

thank you for your response

i wanted to demand how do i configure nctoolbox java path on my r2009a

2014/1/22 Richard Signell <rsig...@gmail.com>

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[Rich Signell]

If you follow the installation instructions the path is configured for
you when you run "setup_nctoolbox"

Falmouth, MA 02540

[Abdoulaye Sy]

thank you Richard the installation is OK now

But on the README file it's writing  
 
"" 3. This sets up nctoolbox for the current Matlab session only.
     You will need to add the following lines to your startup.m file if you would like
     nctoolbox automatically when you start Matlab:

        % Edit "/Path/to/nctoolbox" to correct nctoolbox directory
        addpath("/Path/To/nctoolbox")
        setup_nctoolbox ""

the startup.m is unknown in my release of matlab (r2009a)

 

2014/1/22 Rich Signell <ri...@signell.us>

[Rich Signell]

http://www.mathworks.com/help/matlab/ref/startup.html

[Abdoulaye Sy]

ok i have done it and it's ok

i have always problems with the demo files e.g when i run demo6.m i  have this message
"demo6
% Starting DEMO6 ----------------------------------------------------------
% Gratuitis demo showing AUV path
nav = ncdataset('http://dods.mbari.org/cgi-bin/nph-nc/data/ssdsdata/ssds/generated/netcdf/files/ssds.shore.mbari.org/auvbi/missionlogs/2009/2009173/2009.173.03/navigation.nc');
??? Error using ==> ncdataset>ncdataset.ncdataset at 91
Failed to open
http://dods.mbari.org/cgi-bin/nph-nc/data/ssdsdata/ssds/generated/netcdf/files/ssds.shore.mbari.org/auvbi/missionlogs/2009/2009173/2009.173.03/navigation.nc

Error in ==> demo6 at 7
nav =
ncdataset('http://dods.mbari.org/cgi-bin/nph-nc/data/ssdsdata/ssds/generated/netcdf/files/ssds.shore.mbari.org/auvbi/missionlogs/2009/2009173/2009.173.03/navigation.nc');

Caused by:
    Undefined variable "ucar" or class
    "ucar.nc2.dataset.NetcdfDataset.openDataset". "

2014/1/23 Rich Signell <ri...@signell.us>

[Abdoulaye Sy]

i had this message because i doesn't run setup_nctoolbox.m and setup_nctoolbox_java.m
So I always have to execute setup_nctoolbox.m and setup_nctoolbox_java.m at startup

Thank you Richard for help

2014/1/23 Abdoulaye Sy <ablay...@gmail.com>

[Abdoulaye Sy]

i had this message because i didn't run setup_nctoolbox.m and setup_nctoolbox_java.m

[Rich Signell]

You should only have to run "setup_nctoolbox" because that function
calls setup_nctoolbox_java for you.

If you have edited startup.m and have it in a directory that is in
your matlab path, then you will automatically have nctoolbox loaded
each time you start matlab.

[Abdoulaye Sy]

I did that and everything works as it should
thank you again

2014/1/23 Rich Signell <ri...@signell.us>