SWC File to large. Ways to decrease file size
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Joel Shin
Oct 31, 2024, 9:12:55 PM10/31/24
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Hello Natverse Team!
I am a new user of the natverse library and am trying it out! I have created a simple script that takes in a nrrd file and convert it too a swc file. However, I have ran into an issue when trying to upload a skeleton and map it to flywire. My file size have been crossing more than 5 GB of size. Is there a way to decrease the size? I have used "dotprops(path, k = 20)", xform_brain(dp, sample = "IS2", reference = "JRC2018U") and it doesn't work. If you request the data i have it here: https://gin.g-node.org/Tanimoto_lab/T2A-GAL4_Library/src/master/Dh-31R/UAS-mCD8-GFP_brp-SNAP_IS2_Registration. Each swc files for each nrrd file exceeds 5 GB at least. Thank you and hope to here back from you!
Sincerely, Joel Shin
I am a new user of the natverse library and am trying it out! I have created a simple script that takes in a nrrd file and convert it too a swc file. However, I have ran into an issue when trying to upload a skeleton and map it to flywire. My file size have been crossing more than 5 GB of size. Is there a way to decrease the size? I have used "dotprops(path, k = 20)", xform_brain(dp, sample = "IS2", reference = "JRC2018U") and it doesn't work. If you request the data i have it here: https://gin.g-node.org/Tanimoto_lab/T2A-GAL4_Library/src/master/Dh-31R/UAS-mCD8-GFP_brp-SNAP_IS2_Registration. Each swc files for each nrrd file exceeds 5 GB at least. Thank you and hope to here back from you!
Sincerely, Joel Shin
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