[Support] Possible importing .json from cadnano?

[Feng Geng]

Hi there,

I was developing a DNA nanostructure on cadnano when I realised the utilities in nanoengineer could boost this process. But there seems to be no way to import .json into nanoengineer in a coarse-graining manner. Also the PAM3-PAM5 model seems to differ from the coarse-graining model in oxDNA so that it's impossible to import .pdb from oxDNA, which could result from converting a .json file from cadnano. 

Is there any utilities I can use to interconvert .json in cadnano and .mmp in nanoengineer?

Regards

Feng Geng

UCL

[Bruce Allen]

hi,

The obvious answer here is NanoEngineer-1 has source code and therefore and file format can be read/imported. I have enhanced the MMP file format to include new tokens for atomistic atom types. If I had a funding stream I would update NE-1 for Window/MAC/Linux platforms. 

-bruce 

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