Hi,
The first three integers (nx, ny, nz*noi) is number of cuboids along x, y and z;
noi is the number of images in the GNEB method;
(dx, dx, dx) is the cuboid size in x, y and z;
(1, 1, 0) are boundary conditions along x, y, and z, (0 - open, 1 - periodic).
The last two integers specify for which system we perform GNEB calculations: (0, 1) -- 3D or (1, 0) -- 2D.
I have added descriptions of some new functions there.
Best,
Vlad