Windows msatCommander 0.4.5

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Brant Faircloth

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Feb 27, 2007, 1:10:45 PM2/27/07
to Travis Glenn, ngcra...@gmail.com, pet...@srel.edu, tsy...@srel.edu, msatcomman...@googlegroups.com
hi everyone,

thanks for testing out the program, sorry to bog you down with
emails. from now on, all emails will go to msatcommander-
dis...@googlegroups.com. you can join the group if you want to get
the updates via email...

i posted a new windows version of the program to the web and changed
the link (clicking on this one should always get you the most current
version):

http://gallus.forestry.uga.edu/software/msatcommander/msatcommander-
WINXP-current.zip

be forewarned that when google straightens out the issues on their
end, i will likely post stable versions to:

http://code.google.com/p/msatcommander/

now, on to the good stuff...

changes:

1. no more spacing issues with excel!
2. changed the fasta-reading function to something different - to
help with some other problems. this uses a development (cvs) version
of biopython which appears stable enough...
3. fixed? the window height in the main window

*Note*: the new fasta reader WILL remove additional words in the
fasta filename, so if your sequence name is something like:

>gi|42495666|gb|AY523003.1| Colinus virginianus clone A-9F
microsatellite sequence

the program will keep everything up to the first space... so you get:

>gi|42495666|gb|AY523003.1|

in the output CSV file. if you need a species name in there, just
use pipes w/o spaces or an underscore or something, like:

>CcP2M4A12|ColinusVirginianus

as your clone name.

enjoy.

cheers,
b

Brant Faircloth
fair...@gmail.com
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