msatCommand feature request
Brant Faircloth
> From: Travis Glenn <glenn@s...>
> Date: February 21, 2007 10:49:11 AM EST
> Subject: msatCommand feature request
>
> I'm sending this separately so you can find it easily in future;
> hope that helps.
>
> Here are the features I would really like to see implemented in
> msatCommand:
>
> 1) report when no repeats are found (this way when we give it a
> plate of clones, we can know for sure that a clone does or doesn't
> have a repeat).
>
> 2) produce a summary at the end -- number of sequences searched;
> number of msat repeats found; if possible, number of sequences with
> msats (that may be tricky with the whole multiple msats per clone,
> don't spend a lot of time on this if it's a pita).
>
> 3) at some point in the distant future, it would be great to see
> some graphs of the repeats found & their length distribution - this
> is likely something I could ask Ellen to help with, she is the
> Excel macro queen.
>
> TCG