Is there any way that run percolator after MS Amanda (without PD)

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Honglan Li

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Jan 4, 2021, 10:35:49 PM1/4/21
to MS Amanda
I know that PD support MS Amanda-Percolator.

I want to run percolator after MS Amanda (stand alone) search.

But it is not possible to run percolator directly after MS Amanda search results file (*csv)

Is there any way that run percolator 

after MS Amanda without PD?



Viktoria Dorfer

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Jan 14, 2021, 5:03:12 AM1/14/21
to MS Amanda
Hi!
Yes, if you run MS Amanda within Skyline a Percolator validation is performed after the search. For the standalone version, we are currently working on extending it to be able to run Percolator afterwards. 

Best regards,
Viktoria 

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