no data found, no group level report is generated

[Victoria Liu]

Hello, I'm trying to run MRIQC on my data set, but it seems to generate an error 'raise Exception("No data found. No group level reports were generated.")

Exception: No data found. No group level reports were generated.' I used the command 'docker run -it --rm -v <bids_dir>:/data:ro -v <output_dir>:/out poldracklab/mriqc:latest /data /out group' can someone please tell me where goes wrong? Thanks!

[Oscar Esteban]

Hi Victoria, thanks for contacting. Have you already run all your subjects through the "participant" level? - Please see https://mriqc.readthedocs.io/en/stable/running.html

On Thu, Jul 11, 2019 at 10:57 AM Victoria Liu <victori...@gmail.com> wrote:

Hello, I'm trying to run MRIQC on my data set, but it seems to generate an error 'raise Exception("No data found. No group level reports were generated.")

Exception: No data found. No group level reports were generated.' I used the command 'docker run -it --rm -v <bids_dir>:/data:ro -v <output_dir>:/out poldracklab/mriqc:latest /data /out group' can someone please tell me where goes wrong? Thanks!

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___________________________

Oscar Esteban, Ph.D.
Postdoctoral Fellow, Poldrack Lab
Stanford University

[Victoria Liu]

Yes, I did. The participant level run well, but it just doesn't create a group html file.

[Kirk Geier]

Hi all!

Did this ever get resolved? I am experiencing a very similar issue (having successfully run mriqc with --participant_label I would like to run the group analysis but I am getting the same error. 

[Xiaoqian Jiang]

For me, it need to run all the individual ones before I can proceed to the group level