I assume that is variable values and they are supposed to be nonnegative.
Given that it looks like a violation that is within tolerances. Whether they are or not depends
on the actual model e.g. scaling and general conditioning.
As long as you use an optimizer such as Mosek that employs finite precision floating numbers on a non trivial
model you have to accept minor violations. This is what I learned in my numerical analysis class at university
quite some years ago holds for linear equations and hence by extension also for optimization problems.
To summarize unless you are lucky then changing a flag or two will not solve your problem. How to solve your issue
is hard for me to specify given the limited knowledge I have about what you want to do.
Seeing the complete solution summary i.e.
would be helpful to give a more firm judgement.
PS. You cannot apply the same tolerances in presolve and in the optimizer. This is way more complicated than one naively should think.