M, GC and N files for 70 bp fragment size

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mmo...@gmail.com

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May 9, 2017, 8:12:05 PM5/9/17
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Hi,

I was wondering if you could please share M, GC and N files for binSize= 70 bp (and/or 69bp?), fragment size = 70bp and read length (single end read) = 70 bp, all for HG19

Also, should  we make binSize = 69 so that every read goes exactly into 2 bins? This is actually a general question for all cases with bin = fragment, is it better to make bin = fragment -1?

Thanks

Martin


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