[moriarty] r309 committed - fixed bug with mirror_from_url
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mori...@googlecode.com
Jul 28, 2011, 5:39:51 AM7/28/11
to moriarty...@googlegroups.com
Revision: 309
Author: k.j.w.a...@gmail.com
Date: Thu Jul 28 02:39:23 2011
Log: fixed bug with mirror_from_url
http://code.google.com/p/moriarty/source/detail?r=309
Added:
/branches/2011-05-02-mirror_from_url/tests/documents/before.rdf
/branches/2011-05-02-mirror_from_url/tests/documents/ckan-ds.ttl
Modified:
/branches/2011-05-02-mirror_from_url/changeset.class.php
/branches/2011-05-02-mirror_from_url/store.class.php
/branches/2011-05-02-mirror_from_url/tests/simplegraph.test.php
=======================================
--- /dev/null
+++ /branches/2011-05-02-mirror_from_url/tests/documents/before.rdf Thu Jul
28 02:39:23 2011
@@ -0,0 +1,6 @@
+<?xml version="1.0" encoding="utf-8"?>
+<rdf:RDF xmlns:climb="http://climb.dataincubator.org/vocabs/climb/"
xmlns:dc="http://purl.org/dc/elements/1.1/"
xmlns:dct="http://purl.org/dc/terms/"
xmlns:dctype="http://purl.org/dc/dcmitype/"
xmlns:foaf="http://xmlns.com/foaf/0.1/"
xmlns:geo="http://www.w3.org/2003/01/geo/wgs84_pos#"
xmlns:ns0="http://climb.dataincubator.org/rockTypes/"
xmlns:ov="http://open.vocab.org/terms/"
xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"
xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#">
+ <rdf:Description rdf:about="http://example.org/examples/a">
+ <foaf:knows rdf:resource="http://example.org/examples/b"/>
+ </rdf:Description>
+</rdf:RDF>
=======================================
--- /dev/null
+++ /branches/2011-05-02-mirror_from_url/tests/documents/ckan-ds.ttl Thu
Jul 28 02:39:23 2011
@@ -0,0 +1,288 @@
+@prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> .
+@prefix dc: <http://purl.org/dc/terms/> .
+@prefix dcat: <http://www.w3.org/ns/dcat#> .
+@prefix foaf: <http://xmlns.com/foaf/0.1/> .
+@prefix gis: <http://www.opengis.net/rdf#> .
+@prefix lic: <http://purl.org/okfn/licenses/> .
+@prefix moat: <http://moat-project.org/ns#> .
+@prefix opmv: <http://purl.org/net/opmv/ns#> .
+@prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> .
+@prefix rev: <http://purl.org/stuff/rev#> .
+@prefix time: <http://www.w3.org/2006/time#> .
+@prefix void: <http://rdfs.org/ns/void#> .
+@prefix xsd: <http://www.w3.org/2001/XMLSchema#> .
+@prefix ns1: <http://semantic.ckan.net/schema#> .
+
+<http://ckan.net/package/fu-berlin-diseasome>
+ moat:taggedWithTag <http://ckan.net/tag/deref-vocab>,
<http://ckan.net/tag/lifesciences>, <http://ckan.net/tag/lod>,
<http://ckan.net/tag/no-license-metadata>,
<http://ckan.net/tag/no-provenance-metadata>,
<http://ckan.net/tag/published-by-third-party>,
<http://ckan.net/tag/vocab-mappings>,
<http://ckan.net/tag/void-sparql-endpoint> ;
+ dc:contributor [
+ foaf:mbox <mailto:an...@anjeve.de> ;
+ foaf:name "Anja Jentzsch"
+ ] ;
+ dc:created "2007-04-10T21:19:38Z"^^xsd:dateTime ;
+ dc:description """<p>Linked Data version of Diseasome publishes a
network of 4,300 disorders and disease genes linked by known disorder-gene
associations for exploring all known phenotype and disease gene
associations, indicating the common genetic origin of many diseases. The
list of disorders, disease genes, and associations between them was
obtained from the Online Mendelian Inheritance in Man (OMIM), a compilation
of human disease genes and phenotypes.
+</p>
+<p>OMIM Data Use from http://www.ncbi.nlm.nih.gov/Omim/restrictions.html
+</p>
+<p>Copyright © 1966-2008 Johns Hopkins University.
+</p>
+<p>The OMIM® database including the collective data contained therein is
the property of the Johns Hopkins University, which holds the copyright
thereto.
+</p>
+<p>The OMIM database is made available to the general public subject to
certain restrictions. You may use the OMIM database and data obtained from
this site for your personal use, for educational or scholarly use, or for
research purposes only. The OMIM database may not be copied, distributed,
transmitted, duplicated, reduced or altered in any way for commercial
purposes, or for the purpose of redistribution, without a license from the
Johns Hopkins University.
+</p>
+<p>Requests for information regarding a license for commercial use or
redistribution of the OMIM database may be sent via e-mail to
JHTT-Comm...@jhmi.edu.
+</p>
+<p>links:bio2rdf-symbol: 9743
+</p>""" ;
+
dc:identifier "fa439987-64dc-404c-bc2b-ee5d173f3d62", "fu-berlin-diseasome" ;
+ dc:isPartOf <http://ckan.net/group/lodcloud> ;
+ dc:maintainer [
+ foaf:mbox <mailto:an...@anjeve.de> ;
+ foaf:name "Anja Jentzsch"
+ ] ;
+ dc:modified "2011-07-24T11:59:35Z"^^xsd:dateTime ;
+ dc:rights lic:other-nc ;
+ dc:title "Diseasome" ;
+ rev:rating "5.00"^^xsd:float ;
+ void:exampleResource
<http://www4.wiwiss.fu-berlin.de/diseasome/resource/diseases/74> ;
+ void:sparqlEndpoint
<http://www4.wiwiss.fu-berlin.de/diseasome/sparql> ;
+ void:subset [
+ void:target <http://ckan.net/package/bio2rdf-hgnc>,
<http://ckan.net/package/fu-berlin-diseasome> ;
+ void:triples 688 ;
+ a void:Linkset
+ ], [
+ void:target <http://ckan.net/package/fu-berlin-diseasome>,
<http://ckan.net/package/fu-berlin-sider> ;
+ void:triples 238 ;
+ a void:Linkset
+ ], [
+ void:target <http://ckan.net/package/fu-berlin-dailymed>,
<http://ckan.net/package/fu-berlin-diseasome> ;
+ void:triples 6124 ;
+ a void:Linkset
+ ], [
+ void:target <http://ckan.net/package/fu-berlin-diseasome>,
<http://ckan.net/package/linkedct> ;
+ void:triples 372 ;
+ a void:Linkset
+ ], [
+ void:target <http://ckan.net/package/fu-berlin-diseasome>,
<http://ckan.net/package/fu-berlin-drugbank> ;
+ void:triples 8202 ;
+ a void:Linkset
+ ], [
+ void:target <http://ckan.net/package/fu-berlin-diseasome>,
<http://ckan.net/package/tcmgenedit_dataset> ;
+ void:triples 376 ;
+ a void:Linkset
+ ], [
+ void:target <http://ckan.net/package/dbpedia>,
<http://ckan.net/package/fu-berlin-diseasome> ;
+ void:triples 1943 ;
+ a void:Linkset
+ ], [
+ void:target <http://ckan.net/package/bio2rdf-omim>,
<http://ckan.net/package/fu-berlin-diseasome> ;
+ void:triples 2929 ;
+ a void:Linkset
+ ], [
+ void:target <http://ckan.net/package/bio2rdf-geneid>,
<http://ckan.net/package/fu-berlin-diseasome> ;
+ void:triples 688 ;
+ a void:Linkset
+ ] ;
+ void:triples 91182 ;
+ ns1:extra [
+ rdf:value "6124" ;
+ rdfs:label "links:fu-berlin-dailymed" ;
+ rdfs:seeAlso <http://wiki.ckan.net/extras/links:fu-berlin-dailymed>
+ ], [
+ rdf:value "372" ;
+ rdfs:label "links:linkedct" ;
+ rdfs:seeAlso <http://wiki.ckan.net/extras/links:linkedct>
+ ], [
+ rdf:value "8202" ;
+ rdfs:label "links:fu-berlin-drugbank" ;
+ rdfs:seeAlso <http://wiki.ckan.net/extras/links:fu-berlin-drugbank>
+ ], [
+ rdf:value "376" ;
+ rdfs:label "links:tcmgenedit_dataset" ;
+ rdfs:seeAlso <http://wiki.ckan.net/extras/links:tcmgenedit_dataset>
+ ], [
+ rdf:value "1943" ;
+ rdfs:label "links:dbpedia" ;
+ rdfs:seeAlso <http://wiki.ckan.net/extras/links:dbpedia>
+ ], [
+ rdf:value "2929" ;
+ rdfs:label "links:bio2rdf-omim" ;
+ rdfs:seeAlso <http://wiki.ckan.net/extras/links:bio2rdf-omim>
+ ], [
+ rdf:value "91182" ;
+ rdfs:label "triples" ;
+ rdfs:seeAlso <http://wiki.ckan.net/extras/triples>
+ ], [
+ rdf:value "688" ;
+ rdfs:label "links:bio2rdf-geneid" ;
+ rdfs:seeAlso <http://wiki.ckan.net/extras/links:bio2rdf-geneid>
+ ], [
+ rdf:value "688" ;
+ rdfs:label "links:bio2rdf-hgnc" ;
+ rdfs:seeAlso <http://wiki.ckan.net/extras/links:bio2rdf-hgnc>
+ ], [
+ rdf:value "238" ;
+ rdfs:label "links:fu-berlin-sider" ;
+ rdfs:seeAlso <http://wiki.ckan.net/extras/links:fu-berlin-sider>
+ ], [
+ rdf:value "http://www4.wiwiss.fu-berlin.de/diseasome/resource/" ;
+ rdfs:label "namespace" ;
+ rdfs:seeAlso <http://wiki.ckan.net/extras/namespace>
+ ] ;
+ ns1:json "{\"author\":\"Anja
Jentzsch\",\"author_email\":\"an...@anjeve.de\",\"ckan_url\":\"http://ckan.net/package/fu-berlin-diseasome\",\"download_url\":\"http://www4.wiwiss.fu-berlin.de/diseasome/sparql\",\"extras\":{\"links:bio2rdf-geneid\":\"688\",\"links:bio2rdf-hgnc\":\"688\",\"links:bio2rdf-omim\":\"2929\",\"links:dbpedia\":\"1943\",\"links:fu-berlin-dailymed\":\"6124\",\"links:fu-berlin-drugbank\":\"8202\",\"links:fu-berlin-sider\":\"238\",\"links:linkedct\":\"372\",\"links:tcmgenedit_dataset\":\"376\",\"namespace\":\"http://www4.wiwiss.fu-berlin.de/diseasome/resource/\",\"triples\":\"91182\"},\"groups\":[\"lodcloud\"],\"id\":\"fa439987-64dc-404c-bc2b-ee5d173f3d62\",\"license\":\"Non-OKD
Compliant::Other
(Non-Commercial)\",\"license_id\":\"other-nc\",\"maintainer\":\"Anja
Jentzsch\",\"maintainer_email\":\"an...@anjeve.de\",\"metadata_created\":\"2007-04-10T21:19:38\",\"metadata_modified\":\"2011-07-24T11:59:35.616364\",\"name\":\"fu-berlin-diseasome\",\"notes\":\"Linked
Data version of Diseasome publishes a network of 4,300 disorders and
disease genes linked by known disorder-gene associations for exploring all
known phenotype and disease gene associations, indicating the common
genetic origin of many diseases. The list of disorders, disease genes, and
associations between them was obtained from the Online Mendelian
Inheritance in Man (OMIM), a compilation of human disease genes and
phenotypes.\\u000d\\u000a\\u000d\\u000aOMIM Data Use from
http://www.ncbi.nlm.nih.gov/Omim/restrictions.html\\u000d\\u000a\\u000d\\u000aCopyright
© 1966-2008 Johns Hopkins University.\\u000d\\u000a\\u000d\\u000aThe OMIM®
database including the collective data contained therein is the property of
the Johns Hopkins University, which holds the copyright
thereto.\\u000d\\u000a\\u000d\\u000aThe OMIM database is made available to
the general public subject to certain restrictions. You may use the OMIM
database and data obtained from this site for your personal use, for
educational or scholarly use, or for research purposes only. The OMIM
database may not be copied, distributed, transmitted, duplicated, reduced
or altered in any way for commercial purposes, or for the purpose of
redistribution, without a license from the Johns Hopkins
University.\\u000d\\u000a\\u000d\\u000aRequests for information regarding a
license for commercial use or redistribution of the OMIM database may be
sent via e-mail to
JHTT-Comm...@jhmi.edu.\\u000d\\u000a\\u000d\\u000a\\u000d\\u000alinks:bio2rdf-symbol:
9743\",\"notes_rendered\":\"<p>Linked Data version of Diseasome publishes a
network of 4,300 disorders and disease genes linked by known disorder-gene
associations for exploring all known phenotype and disease gene
associations, indicating the common genetic origin of many diseases. The
list of disorders, disease genes, and associations between them was
obtained from the Online Mendelian Inheritance in Man (OMIM), a compilation
of human disease genes and phenotypes.\\u000a</p>\\u000a<p>OMIM Data Use
from
http://www.ncbi.nlm.nih.gov/Omim/restrictions.html\\u000a</p>\\u000a<p>Copyright
© 1966-2008 Johns Hopkins University.\\u000a</p>\\u000a<p>The OMIM®
database including the collective data contained therein is the property of
the Johns Hopkins University, which holds the copyright
thereto.\\u000a</p>\\u000a<p>The OMIM database is made available to the
general public subject to certain restrictions. You may use the OMIM
database and data obtained from this site for your personal use, for
educational or scholarly use, or for research purposes only. The OMIM
database may not be copied, distributed, transmitted, duplicated, reduced
or altered in any way for commercial purposes, or for the purpose of
redistribution, without a license from the Johns Hopkins
University.\\u000a</p>\\u000a<p>Requests for information regarding a
license for commercial use or redistribution of the OMIM database may be
sent via e-mail to
JHTT-Comm...@jhmi.edu.\\u000a</p>\\u000a<p>links:bio2rdf-symbol:
9743\\u000a</p>\",\"ratings_average\":5,\"ratings_count\":1,\"relationships\":[],\"resources\":[{\"description\":\"SPARQL
endpoint\",\"format\":\"api/sparql\",\"hash\":\"\",\"id\":\"0788fb71-3581-4281-b34e-bbe60503c452\",\"package_id\":\"fa439987-64dc-404c-bc2b-ee5d173f3d62\",\"position\":0,\"resource_group_id\":\"bc18f952-a8a6-a132-cbcc-9d594f379459\",\"url\":\"http://www4.wiwiss.fu-berlin.de/diseasome/sparql\"},{\"description\":\"N-Triples,
bz2
packed\",\"format\":\"application/x-ntriples\",\"hash\":\"\",\"id\":\"15ed9b1e-938a-40e9-b11b-c848741182bf\",\"package_id\":\"fa439987-64dc-404c-bc2b-ee5d173f3d62\",\"position\":1,\"resource_group_id\":\"bc18f952-a8a6-a132-cbcc-9d594f379459\",\"url\":\"http://www4.wiwiss.fu-berlin.de/diseasome/diseasome_dump.nt.bz2\"},{\"description\":\"XML
Sitemap\",\"format\":\"meta/sitemap\",\"hash\":\"\",\"id\":\"89873558-a690-4f82-9b11-abf0f10d0d5e\",\"package_id\":\"fa439987-64dc-404c-bc2b-ee5d173f3d62\",\"position\":2,\"resource_group_id\":\"bc18f952-a8a6-a132-cbcc-9d594f379459\",\"url\":\"http://www4.wiwiss.fu-berlin.de/diseasome/sitemap.xml\"},{\"description\":\"Example
resource\",\"format\":\"example/rdf+xml\",\"hash\":\"\",\"id\":\"e5333f25-5db8-45a4-8c52-daa9cb3a5ddf\",\"package_id\":\"fa439987-64dc-404c-bc2b-ee5d173f3d62\",\"position\":3,\"resource_group_id\":\"bc18f952-a8a6-a132-cbcc-9d594f379459\",\"url\":\"http://www4.wiwiss.fu-berlin.de/diseasome/resource/diseases/74\"}],\"revision_id\":\"c2c9d824-7db2-40b5-bf4f-67e4af7e0460\",\"state\":\"active\",\"tags\":[\"deref-vocab\",\"lifesciences\",\"lod\",\"no-license-metadata\",\"no-provenance-metadata\",\"published-by-third-party\",\"vocab-mappings\",\"void-sparql-endpoint\"],\"title\":\"Diseasome\",\"url\":\"http://www4.wiwiss.fu-berlin.de/diseasome/\",\"version\":\"\"}" ;
+ a dcat:Dataset ;
+ dcat:distribution [
+ dc:description "SPARQL endpoint" ;
+ dc:format [
+ moat:taggedWithTag [
+ moat:name "api/sparql" ;
+ a moat:Tag
+ ] ;
+ a dc:IMT ;
+ rdf:value "application/sparql-results+xml" ;
+ rdfs:label "SPARQL"
+ ] ;
+ a dcat:Distribution ;
+ dcat:accessURL <http://www4.wiwiss.fu-berlin.de/diseasome/sparql>
+ ], [
+ dc:description "N-Triples, bz2 packed" ;
+ dc:format [
+ moat:taggedWithTag [
+ moat:name "application/x-ntriples" ;
+ a moat:Tag
+ ] ;
+ a dc:IMT
+ ] ;
+ a dcat:Distribution ;
+ dcat:accessURL
<http://www4.wiwiss.fu-berlin.de/diseasome/diseasome_dump.nt.bz2>
+ ], [
+ dc:description "XML Sitemap" ;
+ dc:format [
+ moat:taggedWithTag [
+ moat:name "meta/sitemap" ;
+ a moat:Tag
+ ] ;
+ a dc:IMT
+ ] ;
+ a dcat:Distribution ;
+ dcat:accessURL
<http://www4.wiwiss.fu-berlin.de/diseasome/sitemap.xml>
+ ], [
+ dc:description "Example resource" ;
+ dc:format [
+ moat:taggedWithTag [
+ moat:name "example/rdf+xml" ;
+ a moat:Tag
+ ] ;
+ a dc:IMT ;
+ rdf:value "application/rdf+xml" ;
+ rdfs:label "RDF/XML"
+ ] ;
+ a dcat:Distribution ;
+ dcat:accessURL
<http://www4.wiwiss.fu-berlin.de/diseasome/resource/diseases/74>
+ ] ;
+ foaf:homepage <http://www4.wiwiss.fu-berlin.de/diseasome/> .
+
+<http://ckan.net/tag/deref-vocab>
+ moat:name "deref-vocab" ;
+ a moat:Tag .
+
+<http://ckan.net/tag/lifesciences>
+ moat:name "lifesciences" ;
+ a moat:Tag .
+
+<http://ckan.net/tag/lod>
+ moat:name "lod" ;
+ a moat:Tag .
+
+<http://ckan.net/tag/no-license-metadata>
+ moat:name "no-license-metadata" ;
+ a moat:Tag .
+
+<http://ckan.net/tag/no-provenance-metadata>
+ moat:name "no-provenance-metadata" ;
+ a moat:Tag .
+
+<http://ckan.net/tag/published-by-third-party>
+ moat:name "published-by-third-party" ;
+ a moat:Tag .
+
+<http://ckan.net/tag/vocab-mappings>
+ moat:name "vocab-mappings" ;
+ a moat:Tag .
+
+<http://ckan.net/tag/void-sparql-endpoint>
+ moat:name "void-sparql-endpoint" ;
+ a moat:Tag .
+
+<http://semantic.ckan.net/record/fa439987-64dc-404c-bc2b-ee5d173f3d62>
+ dc:source <http://ckan.net/> ;
+ opmv:wasGeneratedBy [
+ opmv:used <http://ckan.net/api/rest/package/fu-berlin-diseasome>,
<http://ckan.net/api/rest/revision/c2c9d824-7db2-40b5-bf4f-67e4af7e0460> ;
+ opmv:wasControlledBy [
+ a foaf:Agent ;
+ foaf:name "GoLD CKAN 1.0"
+ ] ;
+ opmv:wasPerformedAt [
+ a time:Instant ;
+ time:inXSDDateTime "2011-07-27T05:14:47Z"^^xsd:dateTime
+ ] ;
+ a opmv:Process
+ ] ;
+ a dcat:CatalogRecord ;
+ dcat:dataset <http://ckan.net/package/fu-berlin-diseasome> ;
+ foaf:isPrimaryTopicOf
<http://semantic.ckan.net/record/fa439987-64dc-404c-bc2b-ee5d173f3d62.dot>,
<http://semantic.ckan.net/record/fa439987-64dc-404c-bc2b-ee5d173f3d62.html>,
<http://semantic.ckan.net/record/fa439987-64dc-404c-bc2b-ee5d173f3d62.json>,
<http://semantic.ckan.net/record/fa439987-64dc-404c-bc2b-ee5d173f3d62.nt>,
<http://semantic.ckan.net/record/fa439987-64dc-404c-bc2b-ee5d173f3d62.rdf>,
<http://semantic.ckan.net/record/fa439987-64dc-404c-bc2b-ee5d173f3d62.ttl> .
+
+<http://semantic.ckan.net/record/fa439987-64dc-404c-bc2b-ee5d173f3d62.dot>
+ dc:format [
+ a dc:IMT ;
+ rdf:value "text/x-graphviz" ;
+ rdfs:label "Graphviz"
+ ] ;
+ a foaf:Document ;
+ foaf:primaryTopic
<http://semantic.ckan.net/record/fa439987-64dc-404c-bc2b-ee5d173f3d62> .
+
+<http://semantic.ckan.net/record/fa439987-64dc-404c-bc2b-ee5d173f3d62.html>
+ dc:format [
+ a dc:IMT ;
+ rdf:value "application/xhtml+xml" ;
+ rdfs:label "HTML"
+ ] ;
+ a foaf:Document ;
+ foaf:primaryTopic
<http://semantic.ckan.net/record/fa439987-64dc-404c-bc2b-ee5d173f3d62> .
+
+<http://semantic.ckan.net/record/fa439987-64dc-404c-bc2b-ee5d173f3d62.json>
+ dc:format [
+ a dc:IMT ;
+ rdf:value "text/javascript" ;
+ rdfs:label "JSON"
+ ] ;
+ a foaf:Document ;
+ foaf:primaryTopic
<http://semantic.ckan.net/record/fa439987-64dc-404c-bc2b-ee5d173f3d62> .
+
+<http://semantic.ckan.net/record/fa439987-64dc-404c-bc2b-ee5d173f3d62.nt>
+ dc:format [
+ a dc:IMT ;
+ rdf:value "text/plain" ;
+ rdfs:label "N-Triples"
+ ] ;
+ a foaf:Document ;
+ foaf:primaryTopic
<http://semantic.ckan.net/record/fa439987-64dc-404c-bc2b-ee5d173f3d62> .
+
+<http://semantic.ckan.net/record/fa439987-64dc-404c-bc2b-ee5d173f3d62.rdf>
+ dc:format [
+ a dc:IMT ;
+ rdf:value "application/rdf+xml" ;
+ rdfs:label "RDF/XML"
+ ] ;
+ a foaf:Document ;
+ foaf:primaryTopic
<http://semantic.ckan.net/record/fa439987-64dc-404c-bc2b-ee5d173f3d62> .
+
+<http://semantic.ckan.net/record/fa439987-64dc-404c-bc2b-ee5d173f3d62.ttl>
+ dc:format [
+ a dc:IMT ;
+ rdf:value "application/turtle" ;
+ rdfs:label "Turtle"
+ ] ;
+ a foaf:Document ;
+ foaf:primaryTopic
<http://semantic.ckan.net/record/fa439987-64dc-404c-bc2b-ee5d173f3d62> .
+
=======================================
--- /branches/2011-05-02-mirror_from_url/changeset.class.php Sun Feb 21
16:33:32 2010
+++ /branches/2011-05-02-mirror_from_url/changeset.class.php Thu Jul 28
02:39:23 2011
@@ -50,6 +50,7 @@
var $_index = array();
function __construct($a = '') {
+ parent::__construct();
$this->a = $a;
/* parse the before and after graphs if necessary*/
foreach(array('before','after', 'before_rdfxml', 'after_rdfxml') as
$rdf){
=======================================
--- /branches/2011-05-02-mirror_from_url/store.class.php Wed May 18
06:11:50 2011
+++ /branches/2011-05-02-mirror_from_url/store.class.php Thu Jul 28
02:39:23 2011
@@ -237,6 +237,7 @@
$web_page_content = $web_page_response->body;
} else {
$web_page_content = $rdf_content;
+ $return['rdf_content'] = $rdf_content;
}
if($rdf_content OR $web_page_response->is_success() ){
@@ -250,7 +251,7 @@
$cached_page_response = $cached_page_request->execute();
$return['get_copy'] = $cached_page_response;
if($cached_page_response->status_code == '200'){
- $before = $cached_page_response->body;
+ $before = json_decode($cached_page_response->body, true);
} else if( $cached_page_response->status_code == '404' ) {
$before = false;
} else {
=======================================
--- /branches/2011-05-02-mirror_from_url/tests/simplegraph.test.php Thu
May 5 10:17:54 2011
+++ /branches/2011-05-02-mirror_from_url/tests/simplegraph.test.php Thu Jul
28 02:39:23 2011
@@ -1136,6 +1136,16 @@
}
+
+ function
test_number_of_resources_remains_constant_after_skolemise_bnodes(){
+ $graph = new
SimpleGraph(file_get_contents(dirname(__FILE__).'/documents/ckan-ds.ttl'));
+ $index = $graph->get_index();
+ $before = count(array_keys($index));
+ $graph->skolemise_bnodes('http://example.com/test/');
+ $index = $graph->get_index();
+ $after = count(array_keys($index));
+ $this->assertEquals($before, $after, "skolemise_bnodes shouldn't
reduce the number of resources");
+ }
function test_get_bnodes(){
Author: k.j.w.a...@gmail.com
Date: Thu Jul 28 02:39:23 2011
Log: fixed bug with mirror_from_url
http://code.google.com/p/moriarty/source/detail?r=309
Added:
/branches/2011-05-02-mirror_from_url/tests/documents/before.rdf
/branches/2011-05-02-mirror_from_url/tests/documents/ckan-ds.ttl
Modified:
/branches/2011-05-02-mirror_from_url/changeset.class.php
/branches/2011-05-02-mirror_from_url/store.class.php
/branches/2011-05-02-mirror_from_url/tests/simplegraph.test.php
=======================================
--- /dev/null
+++ /branches/2011-05-02-mirror_from_url/tests/documents/before.rdf Thu Jul
28 02:39:23 2011
@@ -0,0 +1,6 @@
+<?xml version="1.0" encoding="utf-8"?>
+<rdf:RDF xmlns:climb="http://climb.dataincubator.org/vocabs/climb/"
xmlns:dc="http://purl.org/dc/elements/1.1/"
xmlns:dct="http://purl.org/dc/terms/"
xmlns:dctype="http://purl.org/dc/dcmitype/"
xmlns:foaf="http://xmlns.com/foaf/0.1/"
xmlns:geo="http://www.w3.org/2003/01/geo/wgs84_pos#"
xmlns:ns0="http://climb.dataincubator.org/rockTypes/"
xmlns:ov="http://open.vocab.org/terms/"
xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"
xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#">
+ <rdf:Description rdf:about="http://example.org/examples/a">
+ <foaf:knows rdf:resource="http://example.org/examples/b"/>
+ </rdf:Description>
+</rdf:RDF>
=======================================
--- /dev/null
+++ /branches/2011-05-02-mirror_from_url/tests/documents/ckan-ds.ttl Thu
Jul 28 02:39:23 2011
@@ -0,0 +1,288 @@
+@prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> .
+@prefix dc: <http://purl.org/dc/terms/> .
+@prefix dcat: <http://www.w3.org/ns/dcat#> .
+@prefix foaf: <http://xmlns.com/foaf/0.1/> .
+@prefix gis: <http://www.opengis.net/rdf#> .
+@prefix lic: <http://purl.org/okfn/licenses/> .
+@prefix moat: <http://moat-project.org/ns#> .
+@prefix opmv: <http://purl.org/net/opmv/ns#> .
+@prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> .
+@prefix rev: <http://purl.org/stuff/rev#> .
+@prefix time: <http://www.w3.org/2006/time#> .
+@prefix void: <http://rdfs.org/ns/void#> .
+@prefix xsd: <http://www.w3.org/2001/XMLSchema#> .
+@prefix ns1: <http://semantic.ckan.net/schema#> .
+
+<http://ckan.net/package/fu-berlin-diseasome>
+ moat:taggedWithTag <http://ckan.net/tag/deref-vocab>,
<http://ckan.net/tag/lifesciences>, <http://ckan.net/tag/lod>,
<http://ckan.net/tag/no-license-metadata>,
<http://ckan.net/tag/no-provenance-metadata>,
<http://ckan.net/tag/published-by-third-party>,
<http://ckan.net/tag/vocab-mappings>,
<http://ckan.net/tag/void-sparql-endpoint> ;
+ dc:contributor [
+ foaf:mbox <mailto:an...@anjeve.de> ;
+ foaf:name "Anja Jentzsch"
+ ] ;
+ dc:created "2007-04-10T21:19:38Z"^^xsd:dateTime ;
+ dc:description """<p>Linked Data version of Diseasome publishes a
network of 4,300 disorders and disease genes linked by known disorder-gene
associations for exploring all known phenotype and disease gene
associations, indicating the common genetic origin of many diseases. The
list of disorders, disease genes, and associations between them was
obtained from the Online Mendelian Inheritance in Man (OMIM), a compilation
of human disease genes and phenotypes.
+</p>
+<p>OMIM Data Use from http://www.ncbi.nlm.nih.gov/Omim/restrictions.html
+</p>
+<p>Copyright © 1966-2008 Johns Hopkins University.
+</p>
+<p>The OMIM® database including the collective data contained therein is
the property of the Johns Hopkins University, which holds the copyright
thereto.
+</p>
+<p>The OMIM database is made available to the general public subject to
certain restrictions. You may use the OMIM database and data obtained from
this site for your personal use, for educational or scholarly use, or for
research purposes only. The OMIM database may not be copied, distributed,
transmitted, duplicated, reduced or altered in any way for commercial
purposes, or for the purpose of redistribution, without a license from the
Johns Hopkins University.
+</p>
+<p>Requests for information regarding a license for commercial use or
redistribution of the OMIM database may be sent via e-mail to
JHTT-Comm...@jhmi.edu.
+</p>
+<p>links:bio2rdf-symbol: 9743
+</p>""" ;
+
dc:identifier "fa439987-64dc-404c-bc2b-ee5d173f3d62", "fu-berlin-diseasome" ;
+ dc:isPartOf <http://ckan.net/group/lodcloud> ;
+ dc:maintainer [
+ foaf:mbox <mailto:an...@anjeve.de> ;
+ foaf:name "Anja Jentzsch"
+ ] ;
+ dc:modified "2011-07-24T11:59:35Z"^^xsd:dateTime ;
+ dc:rights lic:other-nc ;
+ dc:title "Diseasome" ;
+ rev:rating "5.00"^^xsd:float ;
+ void:exampleResource
<http://www4.wiwiss.fu-berlin.de/diseasome/resource/diseases/74> ;
+ void:sparqlEndpoint
<http://www4.wiwiss.fu-berlin.de/diseasome/sparql> ;
+ void:subset [
+ void:target <http://ckan.net/package/bio2rdf-hgnc>,
<http://ckan.net/package/fu-berlin-diseasome> ;
+ void:triples 688 ;
+ a void:Linkset
+ ], [
+ void:target <http://ckan.net/package/fu-berlin-diseasome>,
<http://ckan.net/package/fu-berlin-sider> ;
+ void:triples 238 ;
+ a void:Linkset
+ ], [
+ void:target <http://ckan.net/package/fu-berlin-dailymed>,
<http://ckan.net/package/fu-berlin-diseasome> ;
+ void:triples 6124 ;
+ a void:Linkset
+ ], [
+ void:target <http://ckan.net/package/fu-berlin-diseasome>,
<http://ckan.net/package/linkedct> ;
+ void:triples 372 ;
+ a void:Linkset
+ ], [
+ void:target <http://ckan.net/package/fu-berlin-diseasome>,
<http://ckan.net/package/fu-berlin-drugbank> ;
+ void:triples 8202 ;
+ a void:Linkset
+ ], [
+ void:target <http://ckan.net/package/fu-berlin-diseasome>,
<http://ckan.net/package/tcmgenedit_dataset> ;
+ void:triples 376 ;
+ a void:Linkset
+ ], [
+ void:target <http://ckan.net/package/dbpedia>,
<http://ckan.net/package/fu-berlin-diseasome> ;
+ void:triples 1943 ;
+ a void:Linkset
+ ], [
+ void:target <http://ckan.net/package/bio2rdf-omim>,
<http://ckan.net/package/fu-berlin-diseasome> ;
+ void:triples 2929 ;
+ a void:Linkset
+ ], [
+ void:target <http://ckan.net/package/bio2rdf-geneid>,
<http://ckan.net/package/fu-berlin-diseasome> ;
+ void:triples 688 ;
+ a void:Linkset
+ ] ;
+ void:triples 91182 ;
+ ns1:extra [
+ rdf:value "6124" ;
+ rdfs:label "links:fu-berlin-dailymed" ;
+ rdfs:seeAlso <http://wiki.ckan.net/extras/links:fu-berlin-dailymed>
+ ], [
+ rdf:value "372" ;
+ rdfs:label "links:linkedct" ;
+ rdfs:seeAlso <http://wiki.ckan.net/extras/links:linkedct>
+ ], [
+ rdf:value "8202" ;
+ rdfs:label "links:fu-berlin-drugbank" ;
+ rdfs:seeAlso <http://wiki.ckan.net/extras/links:fu-berlin-drugbank>
+ ], [
+ rdf:value "376" ;
+ rdfs:label "links:tcmgenedit_dataset" ;
+ rdfs:seeAlso <http://wiki.ckan.net/extras/links:tcmgenedit_dataset>
+ ], [
+ rdf:value "1943" ;
+ rdfs:label "links:dbpedia" ;
+ rdfs:seeAlso <http://wiki.ckan.net/extras/links:dbpedia>
+ ], [
+ rdf:value "2929" ;
+ rdfs:label "links:bio2rdf-omim" ;
+ rdfs:seeAlso <http://wiki.ckan.net/extras/links:bio2rdf-omim>
+ ], [
+ rdf:value "91182" ;
+ rdfs:label "triples" ;
+ rdfs:seeAlso <http://wiki.ckan.net/extras/triples>
+ ], [
+ rdf:value "688" ;
+ rdfs:label "links:bio2rdf-geneid" ;
+ rdfs:seeAlso <http://wiki.ckan.net/extras/links:bio2rdf-geneid>
+ ], [
+ rdf:value "688" ;
+ rdfs:label "links:bio2rdf-hgnc" ;
+ rdfs:seeAlso <http://wiki.ckan.net/extras/links:bio2rdf-hgnc>
+ ], [
+ rdf:value "238" ;
+ rdfs:label "links:fu-berlin-sider" ;
+ rdfs:seeAlso <http://wiki.ckan.net/extras/links:fu-berlin-sider>
+ ], [
+ rdf:value "http://www4.wiwiss.fu-berlin.de/diseasome/resource/" ;
+ rdfs:label "namespace" ;
+ rdfs:seeAlso <http://wiki.ckan.net/extras/namespace>
+ ] ;
+ ns1:json "{\"author\":\"Anja
Jentzsch\",\"author_email\":\"an...@anjeve.de\",\"ckan_url\":\"http://ckan.net/package/fu-berlin-diseasome\",\"download_url\":\"http://www4.wiwiss.fu-berlin.de/diseasome/sparql\",\"extras\":{\"links:bio2rdf-geneid\":\"688\",\"links:bio2rdf-hgnc\":\"688\",\"links:bio2rdf-omim\":\"2929\",\"links:dbpedia\":\"1943\",\"links:fu-berlin-dailymed\":\"6124\",\"links:fu-berlin-drugbank\":\"8202\",\"links:fu-berlin-sider\":\"238\",\"links:linkedct\":\"372\",\"links:tcmgenedit_dataset\":\"376\",\"namespace\":\"http://www4.wiwiss.fu-berlin.de/diseasome/resource/\",\"triples\":\"91182\"},\"groups\":[\"lodcloud\"],\"id\":\"fa439987-64dc-404c-bc2b-ee5d173f3d62\",\"license\":\"Non-OKD
Compliant::Other
(Non-Commercial)\",\"license_id\":\"other-nc\",\"maintainer\":\"Anja
Jentzsch\",\"maintainer_email\":\"an...@anjeve.de\",\"metadata_created\":\"2007-04-10T21:19:38\",\"metadata_modified\":\"2011-07-24T11:59:35.616364\",\"name\":\"fu-berlin-diseasome\",\"notes\":\"Linked
Data version of Diseasome publishes a network of 4,300 disorders and
disease genes linked by known disorder-gene associations for exploring all
known phenotype and disease gene associations, indicating the common
genetic origin of many diseases. The list of disorders, disease genes, and
associations between them was obtained from the Online Mendelian
Inheritance in Man (OMIM), a compilation of human disease genes and
phenotypes.\\u000d\\u000a\\u000d\\u000aOMIM Data Use from
http://www.ncbi.nlm.nih.gov/Omim/restrictions.html\\u000d\\u000a\\u000d\\u000aCopyright
© 1966-2008 Johns Hopkins University.\\u000d\\u000a\\u000d\\u000aThe OMIM®
database including the collective data contained therein is the property of
the Johns Hopkins University, which holds the copyright
thereto.\\u000d\\u000a\\u000d\\u000aThe OMIM database is made available to
the general public subject to certain restrictions. You may use the OMIM
database and data obtained from this site for your personal use, for
educational or scholarly use, or for research purposes only. The OMIM
database may not be copied, distributed, transmitted, duplicated, reduced
or altered in any way for commercial purposes, or for the purpose of
redistribution, without a license from the Johns Hopkins
University.\\u000d\\u000a\\u000d\\u000aRequests for information regarding a
license for commercial use or redistribution of the OMIM database may be
sent via e-mail to
JHTT-Comm...@jhmi.edu.\\u000d\\u000a\\u000d\\u000a\\u000d\\u000alinks:bio2rdf-symbol:
9743\",\"notes_rendered\":\"<p>Linked Data version of Diseasome publishes a
network of 4,300 disorders and disease genes linked by known disorder-gene
associations for exploring all known phenotype and disease gene
associations, indicating the common genetic origin of many diseases. The
list of disorders, disease genes, and associations between them was
obtained from the Online Mendelian Inheritance in Man (OMIM), a compilation
of human disease genes and phenotypes.\\u000a</p>\\u000a<p>OMIM Data Use
from
http://www.ncbi.nlm.nih.gov/Omim/restrictions.html\\u000a</p>\\u000a<p>Copyright
© 1966-2008 Johns Hopkins University.\\u000a</p>\\u000a<p>The OMIM®
database including the collective data contained therein is the property of
the Johns Hopkins University, which holds the copyright
thereto.\\u000a</p>\\u000a<p>The OMIM database is made available to the
general public subject to certain restrictions. You may use the OMIM
database and data obtained from this site for your personal use, for
educational or scholarly use, or for research purposes only. The OMIM
database may not be copied, distributed, transmitted, duplicated, reduced
or altered in any way for commercial purposes, or for the purpose of
redistribution, without a license from the Johns Hopkins
University.\\u000a</p>\\u000a<p>Requests for information regarding a
license for commercial use or redistribution of the OMIM database may be
sent via e-mail to
JHTT-Comm...@jhmi.edu.\\u000a</p>\\u000a<p>links:bio2rdf-symbol:
9743\\u000a</p>\",\"ratings_average\":5,\"ratings_count\":1,\"relationships\":[],\"resources\":[{\"description\":\"SPARQL
endpoint\",\"format\":\"api/sparql\",\"hash\":\"\",\"id\":\"0788fb71-3581-4281-b34e-bbe60503c452\",\"package_id\":\"fa439987-64dc-404c-bc2b-ee5d173f3d62\",\"position\":0,\"resource_group_id\":\"bc18f952-a8a6-a132-cbcc-9d594f379459\",\"url\":\"http://www4.wiwiss.fu-berlin.de/diseasome/sparql\"},{\"description\":\"N-Triples,
bz2
packed\",\"format\":\"application/x-ntriples\",\"hash\":\"\",\"id\":\"15ed9b1e-938a-40e9-b11b-c848741182bf\",\"package_id\":\"fa439987-64dc-404c-bc2b-ee5d173f3d62\",\"position\":1,\"resource_group_id\":\"bc18f952-a8a6-a132-cbcc-9d594f379459\",\"url\":\"http://www4.wiwiss.fu-berlin.de/diseasome/diseasome_dump.nt.bz2\"},{\"description\":\"XML
Sitemap\",\"format\":\"meta/sitemap\",\"hash\":\"\",\"id\":\"89873558-a690-4f82-9b11-abf0f10d0d5e\",\"package_id\":\"fa439987-64dc-404c-bc2b-ee5d173f3d62\",\"position\":2,\"resource_group_id\":\"bc18f952-a8a6-a132-cbcc-9d594f379459\",\"url\":\"http://www4.wiwiss.fu-berlin.de/diseasome/sitemap.xml\"},{\"description\":\"Example
resource\",\"format\":\"example/rdf+xml\",\"hash\":\"\",\"id\":\"e5333f25-5db8-45a4-8c52-daa9cb3a5ddf\",\"package_id\":\"fa439987-64dc-404c-bc2b-ee5d173f3d62\",\"position\":3,\"resource_group_id\":\"bc18f952-a8a6-a132-cbcc-9d594f379459\",\"url\":\"http://www4.wiwiss.fu-berlin.de/diseasome/resource/diseases/74\"}],\"revision_id\":\"c2c9d824-7db2-40b5-bf4f-67e4af7e0460\",\"state\":\"active\",\"tags\":[\"deref-vocab\",\"lifesciences\",\"lod\",\"no-license-metadata\",\"no-provenance-metadata\",\"published-by-third-party\",\"vocab-mappings\",\"void-sparql-endpoint\"],\"title\":\"Diseasome\",\"url\":\"http://www4.wiwiss.fu-berlin.de/diseasome/\",\"version\":\"\"}" ;
+ a dcat:Dataset ;
+ dcat:distribution [
+ dc:description "SPARQL endpoint" ;
+ dc:format [
+ moat:taggedWithTag [
+ moat:name "api/sparql" ;
+ a moat:Tag
+ ] ;
+ a dc:IMT ;
+ rdf:value "application/sparql-results+xml" ;
+ rdfs:label "SPARQL"
+ ] ;
+ a dcat:Distribution ;
+ dcat:accessURL <http://www4.wiwiss.fu-berlin.de/diseasome/sparql>
+ ], [
+ dc:description "N-Triples, bz2 packed" ;
+ dc:format [
+ moat:taggedWithTag [
+ moat:name "application/x-ntriples" ;
+ a moat:Tag
+ ] ;
+ a dc:IMT
+ ] ;
+ a dcat:Distribution ;
+ dcat:accessURL
<http://www4.wiwiss.fu-berlin.de/diseasome/diseasome_dump.nt.bz2>
+ ], [
+ dc:description "XML Sitemap" ;
+ dc:format [
+ moat:taggedWithTag [
+ moat:name "meta/sitemap" ;
+ a moat:Tag
+ ] ;
+ a dc:IMT
+ ] ;
+ a dcat:Distribution ;
+ dcat:accessURL
<http://www4.wiwiss.fu-berlin.de/diseasome/sitemap.xml>
+ ], [
+ dc:description "Example resource" ;
+ dc:format [
+ moat:taggedWithTag [
+ moat:name "example/rdf+xml" ;
+ a moat:Tag
+ ] ;
+ a dc:IMT ;
+ rdf:value "application/rdf+xml" ;
+ rdfs:label "RDF/XML"
+ ] ;
+ a dcat:Distribution ;
+ dcat:accessURL
<http://www4.wiwiss.fu-berlin.de/diseasome/resource/diseases/74>
+ ] ;
+ foaf:homepage <http://www4.wiwiss.fu-berlin.de/diseasome/> .
+
+<http://ckan.net/tag/deref-vocab>
+ moat:name "deref-vocab" ;
+ a moat:Tag .
+
+<http://ckan.net/tag/lifesciences>
+ moat:name "lifesciences" ;
+ a moat:Tag .
+
+<http://ckan.net/tag/lod>
+ moat:name "lod" ;
+ a moat:Tag .
+
+<http://ckan.net/tag/no-license-metadata>
+ moat:name "no-license-metadata" ;
+ a moat:Tag .
+
+<http://ckan.net/tag/no-provenance-metadata>
+ moat:name "no-provenance-metadata" ;
+ a moat:Tag .
+
+<http://ckan.net/tag/published-by-third-party>
+ moat:name "published-by-third-party" ;
+ a moat:Tag .
+
+<http://ckan.net/tag/vocab-mappings>
+ moat:name "vocab-mappings" ;
+ a moat:Tag .
+
+<http://ckan.net/tag/void-sparql-endpoint>
+ moat:name "void-sparql-endpoint" ;
+ a moat:Tag .
+
+<http://semantic.ckan.net/record/fa439987-64dc-404c-bc2b-ee5d173f3d62>
+ dc:source <http://ckan.net/> ;
+ opmv:wasGeneratedBy [
+ opmv:used <http://ckan.net/api/rest/package/fu-berlin-diseasome>,
<http://ckan.net/api/rest/revision/c2c9d824-7db2-40b5-bf4f-67e4af7e0460> ;
+ opmv:wasControlledBy [
+ a foaf:Agent ;
+ foaf:name "GoLD CKAN 1.0"
+ ] ;
+ opmv:wasPerformedAt [
+ a time:Instant ;
+ time:inXSDDateTime "2011-07-27T05:14:47Z"^^xsd:dateTime
+ ] ;
+ a opmv:Process
+ ] ;
+ a dcat:CatalogRecord ;
+ dcat:dataset <http://ckan.net/package/fu-berlin-diseasome> ;
+ foaf:isPrimaryTopicOf
<http://semantic.ckan.net/record/fa439987-64dc-404c-bc2b-ee5d173f3d62.dot>,
<http://semantic.ckan.net/record/fa439987-64dc-404c-bc2b-ee5d173f3d62.html>,
<http://semantic.ckan.net/record/fa439987-64dc-404c-bc2b-ee5d173f3d62.json>,
<http://semantic.ckan.net/record/fa439987-64dc-404c-bc2b-ee5d173f3d62.nt>,
<http://semantic.ckan.net/record/fa439987-64dc-404c-bc2b-ee5d173f3d62.rdf>,
<http://semantic.ckan.net/record/fa439987-64dc-404c-bc2b-ee5d173f3d62.ttl> .
+
+<http://semantic.ckan.net/record/fa439987-64dc-404c-bc2b-ee5d173f3d62.dot>
+ dc:format [
+ a dc:IMT ;
+ rdf:value "text/x-graphviz" ;
+ rdfs:label "Graphviz"
+ ] ;
+ a foaf:Document ;
+ foaf:primaryTopic
<http://semantic.ckan.net/record/fa439987-64dc-404c-bc2b-ee5d173f3d62> .
+
+<http://semantic.ckan.net/record/fa439987-64dc-404c-bc2b-ee5d173f3d62.html>
+ dc:format [
+ a dc:IMT ;
+ rdf:value "application/xhtml+xml" ;
+ rdfs:label "HTML"
+ ] ;
+ a foaf:Document ;
+ foaf:primaryTopic
<http://semantic.ckan.net/record/fa439987-64dc-404c-bc2b-ee5d173f3d62> .
+
+<http://semantic.ckan.net/record/fa439987-64dc-404c-bc2b-ee5d173f3d62.json>
+ dc:format [
+ a dc:IMT ;
+ rdf:value "text/javascript" ;
+ rdfs:label "JSON"
+ ] ;
+ a foaf:Document ;
+ foaf:primaryTopic
<http://semantic.ckan.net/record/fa439987-64dc-404c-bc2b-ee5d173f3d62> .
+
+<http://semantic.ckan.net/record/fa439987-64dc-404c-bc2b-ee5d173f3d62.nt>
+ dc:format [
+ a dc:IMT ;
+ rdf:value "text/plain" ;
+ rdfs:label "N-Triples"
+ ] ;
+ a foaf:Document ;
+ foaf:primaryTopic
<http://semantic.ckan.net/record/fa439987-64dc-404c-bc2b-ee5d173f3d62> .
+
+<http://semantic.ckan.net/record/fa439987-64dc-404c-bc2b-ee5d173f3d62.rdf>
+ dc:format [
+ a dc:IMT ;
+ rdf:value "application/rdf+xml" ;
+ rdfs:label "RDF/XML"
+ ] ;
+ a foaf:Document ;
+ foaf:primaryTopic
<http://semantic.ckan.net/record/fa439987-64dc-404c-bc2b-ee5d173f3d62> .
+
+<http://semantic.ckan.net/record/fa439987-64dc-404c-bc2b-ee5d173f3d62.ttl>
+ dc:format [
+ a dc:IMT ;
+ rdf:value "application/turtle" ;
+ rdfs:label "Turtle"
+ ] ;
+ a foaf:Document ;
+ foaf:primaryTopic
<http://semantic.ckan.net/record/fa439987-64dc-404c-bc2b-ee5d173f3d62> .
+
=======================================
--- /branches/2011-05-02-mirror_from_url/changeset.class.php Sun Feb 21
16:33:32 2010
+++ /branches/2011-05-02-mirror_from_url/changeset.class.php Thu Jul 28
02:39:23 2011
@@ -50,6 +50,7 @@
var $_index = array();
function __construct($a = '') {
+ parent::__construct();
$this->a = $a;
/* parse the before and after graphs if necessary*/
foreach(array('before','after', 'before_rdfxml', 'after_rdfxml') as
$rdf){
=======================================
--- /branches/2011-05-02-mirror_from_url/store.class.php Wed May 18
06:11:50 2011
+++ /branches/2011-05-02-mirror_from_url/store.class.php Thu Jul 28
02:39:23 2011
@@ -237,6 +237,7 @@
$web_page_content = $web_page_response->body;
} else {
$web_page_content = $rdf_content;
+ $return['rdf_content'] = $rdf_content;
}
if($rdf_content OR $web_page_response->is_success() ){
@@ -250,7 +251,7 @@
$cached_page_response = $cached_page_request->execute();
$return['get_copy'] = $cached_page_response;
if($cached_page_response->status_code == '200'){
- $before = $cached_page_response->body;
+ $before = json_decode($cached_page_response->body, true);
} else if( $cached_page_response->status_code == '404' ) {
$before = false;
} else {
=======================================
--- /branches/2011-05-02-mirror_from_url/tests/simplegraph.test.php Thu
May 5 10:17:54 2011
+++ /branches/2011-05-02-mirror_from_url/tests/simplegraph.test.php Thu Jul
28 02:39:23 2011
@@ -1136,6 +1136,16 @@
}
+
+ function
test_number_of_resources_remains_constant_after_skolemise_bnodes(){
+ $graph = new
SimpleGraph(file_get_contents(dirname(__FILE__).'/documents/ckan-ds.ttl'));
+ $index = $graph->get_index();
+ $before = count(array_keys($index));
+ $graph->skolemise_bnodes('http://example.com/test/');
+ $index = $graph->get_index();
+ $after = count(array_keys($index));
+ $this->assertEquals($before, $after, "skolemise_bnodes shouldn't
reduce the number of resources");
+ }
function test_get_bnodes(){
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