How to switch a molecule from chemical (hetatom) to peptide?

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Andrew Orry

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May 11, 2022, 1:11:13 PM5/11/22
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Q. I have a molecule that is a peptide but it is shown in ICM as a small molecule and is not recognized as a peptide. How to switch a molecule from chemical (hetatom) to peptide. 
A. 
Use the command convertPepToHet - second argument l_reverse controls it

BS ala ala ala trp ala
convertPepToHet a_ no  # pet -> het
 Type(a_1 2)
convertPepToHet a_ no  # het -> pep
 Type(a_1 2)


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