"Error> [3452] no ATOM/HETATM records found in file /tmp/url1701 (is it a PDB-file?)"

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Andrew Orry

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Jun 15, 2017, 12:42:11 PM6/15/17
to MolSoft ICM Knowledge Base
Q.
I receive this error message when I try to search PDB using the search tab.
A.
This can usually be fixed by changing the way ICM retrieves PDB files.
You can change  your pdbDirStyle  to ftp e.g.
icm/4yzi> pdbDirStyle
  pdbDirStyle      = "PDB web-site"
        1 = "1abc.pdb"
        2 = "pdb1abc.ent"
        3 = "ab/pdb1abc.ent"
        4 = "ab/pdb1abc.ent.Z"
        5 = "ab/pdb1abc.ent.gz"
        6 = "PDB ftp-site"
        7 = "PDB web-site" <-- current choice
icm/4yzi> pdbDirStyle = 6 


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