FTP download

[Arshad Shaikh]

Hi everyone,

I am having trouble in downloading datasets from ftp server. Please help me.

ftp://massive.ucsd.edu/MSV000082678/

[Arshad Shaikh]

Google chrome is not working but internet explorer did. Finally downloaded the file.

[Ricardo M Borges]

I was about to ask how to download datasets using winSCP. Any tips?

[Mingxun Wang]

FTP has been removed from most modern browsers. I personally use CyberDuck to download public FTP files on Windows. 

Ming

[Mingxun Wang]

Additionally, for this specific dataset, we've added a browser on MassIVE to view all files and provide convenient downloads for single files if that is helpful:

https://massive.ucsd.edu/ProteoSAFe/dataset_files.jsp?task=de2d18fd91804785bce8c225cc94a444#%7B%22table_sort_history%22%3A%22main.collection_asc%22%7D

Additionally, if you just want to look at data, you can using the GNPS Dashboard, e.g.:

https://gnps-lcms.ucsd.edu/#%7B%22usi%22%3A%20%22mzspec%3AMSV000082678%3Accms_peak/AMG_Plant_subset/30_plants_or_more/10712_P4_RH3_01_521.mzML%22%2C%20%22usi2%22%3A%20%22%22%7D

and you can browse all files with metadata here: 

https://gnps-explorer.ucsd.edu/?dataset_accession=MSV000082678&metadata_source=DEFAULT&metadata_option=f.MSV000086206%2Fmetadata%2Fmetadata.txt

Hope this helps,

Ming

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[Justin zhou]

I have downloaded a dataset with FileZilla today. It works fine for me.

This is the link of FileZilla:

https://filezilla-project.org/

[Ricardo M Borges]

when I login with winSCP, I only get access to the data I uploaded and not to the MASSive. How can I get there?

[g6ca...@ucsd.edu]

Hello mborges...@gmail.com,

Try an anonymous login. See instructions here: Download Dataset Files - MassIVE Documentation (ccms-ucsd.github.io)

[g6ca...@ucsd.edu]

Hello, 

I am having trouble downloading various "older" MASSIVE datasets. 
When I connect to massive.ucsd.edu server via FTP, I see two folders "v01" and "v02". 
I cannot open folder "v01", which I think contains the MASSIVE datasets I am looking for, due to server issues or issues with my connection.
However, I can open folder "v02", which contains "newer" MASSIVE datasets starting from MSV000092832. 

Could someone help me download the older MASSIVE datasets? 

Thank you!

-Gabriel

[g6ca...@ucsd.edu]

Solved. 

I did not get the problem using FileZilla 7.66. 

I was getting the problem using Cyberduck 7.6. 

[Ainsely Lewis]

Hello: 

Please check if your system has been compromised.

 

Based on documentation here: https://ccms-ucsd.github.io/GNPSDocumentation/quickstart/ FileZilla is no longer used as it contains malware. 

WinSCP works. Used Cyberduck without issues. Unrelated but just thought to let you know. 

 

To view this discussion on the web visit https://groups.google.com/d/msgid/molecular_networking_bug_reports/4bd86a64-1910-4fb6-89a5-520d62747ab9n%40googlegroups.com.

[g6ca...@ucsd.edu]

Thank you, Ainsely.