Hi guys,
Thank you so much for all the useful tips. I think the most possible reason in my case may be the dry cell or the sharp gradients between grids. The model is now built for the entire continental U.S., where there should be many grids with very steep elevation changes (Rocky mountain area for example). Also, a previous steady-state map shows over many areas the water table is far below land surface ("dry cell").
There are two ways for me to solve this problem based on the Waterloo's website Jakab sends, first is to reduce the gradient of either elevation difference or the hydraulic conductivity. But my concern is whether doing so is reasonable because manually adjusting the parameters would introduce artificial error and would cause the model settings unrealistic.
The second one is to employ NWT solver, which sounds more feasible to me. But I wonder how should I set up appropriate NWT parameters? I checked some materials but it's still unclear which parameters I should explicitly include (under_relaxation_theta, kappa,gamma, etc.), and which parameters are for linear/non-linear solutions. I'm not even sure whether I should choose linear or non-linear solver for my case. If anyone can give me further advice on this matter I'll much appreciate it.
To Ishita: Thanks a lot for your interests and kind offer to help! I'm using modflow6, with the horizontal cell size of 10km-by-10km, and aquifer depth of ~1000m. The model has only a single unconfined layer but I think it's very heterogeneous because it's for the entire CONUS. Let me know if you need more info.