I'm running the example analysis without problems until I got to the point of running with dates + lineages.
When I run:
explore_mutations(muts.df = samp_mutations,
dates = system.file(muts.df = samp_mutations,
package = "MixviR"),
lineage.muts = system.file("extdata",
package = "MixviR"))
I get the following error message:
Error: '' does not exist in current working directory ('C:/Users/Lenovo/Documents')
Am I doing something wrong? The shiny window appeared as expected until the previous step (with dates only).