expression of some lncRNAs ; tissues

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jlerg...@gmail.com

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Nov 19, 2016, 12:17:09 PM11/19/16
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Nice work. Very interesting job, indeed.
However, you just provide ~8,000 lncRNAs with the release of the paper.

In my group, we are studying some specific structural variants, and specifically, I am interested in knowing which tissues a set of lncRNAs is expressed in.
I found them in the browser, but they are not available in the expression data files.

I do not if you can send me what I need. It would be great if you could provide in which tissues the following transcripts are expressed:

"T300725" "T300726" "T300727" "T300728"

"T136240" "T136241" "T136242" "T136243" "T136244" "T136245" "T136246" "T136247" "T136249" "T136250" "T136251" "T136252"
 "T136253" "T136254" "T136255"

"T364942" "T364944" "T364947" "T364949" "T364950" "T364951" "T364952" "T364953" "T364954" "T364955" "T364956" "T364957"
"T364958"

"T267850" "T267851" "T267852" "T267853" "T267854"

"T247634" "T247647" "T247650" "T247651" "T247652" "T247654" "T247655" "T247656" "T247657" "T247658" "T247659" "T247660"

"T051998" "T052000" "T052001" "T052002" "T052003"

"T291019" "T291020"

"T063137" "T063151" "T063174" "T063178" "T063179" "T063180" "T063184"

"T211318" "T211319" "T211320" "T211321" "T211322" "T211323" "T211324" "T211325" "T211326" "T211327" "T211328" "T211329"
"T211330" "T211331" "T211332" "T211333" "T211334" "T211335" "T211336" "T211337" "T211338" "T211339" "T211340" "T211341"
"T211342" "T211343" "T211344" "T211345" "T211346" "T211347" "T211348" "T211349" "T211350" "T211351" "T211352" "T211353"
"T211354" "T211355" "T211376" "T211377" "T211378" "T211379" "T211380" "T211381" "T211383" "T211386" "T211388"

"T295364" "T295366" "T295367" "T295368" "T295369"

 "T095529"

"T096691"

"T102739" "T102740" "T102741"

"T105468" "T105469" "T105470" "T105471"

"T171565" "T171568" "T171569" "T171570" "T171572" "T171648" "T171656" "T171657" "T171658" "T171659" "T171660"

"T382481" "T382497" "T382498"

"T377781" "T377783" "T377784" "T377785" "T377786" "T377787" "T377788" "T377789" "T377790"

"T376309" "T376310" "T376311" "T376312" "T376313" "T376314" "T376315"

"T378388"

"T376562" "T376563" "T376564" "T376565"

"T143394" "T143395" "T143396" "T143397" "T143398" "T143399" "T143400" "T143401" "T143402" "T143403" "T143404" "T143405"
"T143406" "T143412" "T143413" "T143414" "T143415" "T143473" "T143474"



Thank you very much for your help.
Kind regards,
Jon

jlerg...@gmail.com

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Nov 22, 2016, 10:51:12 AM11/22/16
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Only these:
"T300725" "T300726" "T300727" "T300728"

Please.
Many thanks

Yashar Niknafs

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Dec 6, 2016, 9:55:53 PM12/6/16
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Hello, 

I am attaching files that should have the information you need. Please let me know if you have any other questions. 

-Yashar 
transcripts.expr.tsv
colmeta.tsv

jlerg...@gmail.com

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Dec 14, 2016, 11:28:00 AM12/14/16
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Many many thanks, Yashar!!

Could you send me the same information but for the transcript T291020?

We want to obtain clear evidence of the existance of this transcript. Specifically, if the first exon (which is completely novel) is true. Any suggestion?

Thank you very much again,
Jon

jlerg...@gmail.com

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Jan 10, 2017, 7:29:28 AM1/10/17
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Please, it would be great if you could provide in which tissues the transcript T291020 is expressed.
It is very interesting for our research.

Thank you again!
Jon
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