Full MiTranscriptome dataset

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jobv...@gmail.com

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Jan 5, 2017, 12:05:49 PM1/5/17
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Dear Yashar (and others),

For a project concerning the expression patterns of genome-wide transcripts in cancer, we would like to incorporate the MiTranscriptome dataset.
What is the procedure to gain access to the full MiTranscriptome dataset files, e.g. GTF/BED transcript annotations, library annotation and expression count matrixes of all lncRNAs and protein-coding transcripts?

I've seen several posts on this forum hinting at a late summer (2016) release of the entire MiTranscriptome expression dataset but I am unsure whether the currently available files via the MiTranscriptome site contain 'all' transcripts?
(These files only contain the expression values of 16981 transcripts)

Kind regards,

Ing. Job van Riet
Bioinformatician/PhD candidate

Cancer Computational Biology Center
Erasmus MC

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