Miniscope

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Welcome to the Miniscope Google Group! Here you can discuss all things related to miniature microscopy and the UCLA Miniscope project.

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Ella Hanzin, Federico Sangiuliano3

Dec 8

Seeking Help with Miniscope Stability Issue

Hi Federico, just resending the solution so everyone can see Yes, this part somehow became unglued,

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Seeking Help with Miniscope Stability Issue

Hi Federico, just resending the solution so everyone can see Yes, this part somehow became unglued,

Dec 8

Dec 8

Assistance with Minian final Merge option

Hi all, I'm reaching out for help with using the merge option in Minian. I've successfully

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Assistance with Minian final Merge option

Hi all, I'm reaching out for help with using the merge option in Minian. I've successfully

Dec 8

Dec 5

custom baseplate optimisation

Hello miniscope gang! First off, massive thanks to the creators and community for all the effort you

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custom baseplate optimisation

Hello miniscope gang! First off, massive thanks to the creators and community for all the effort you

Dec 5

Dec 4

Miniscope & TRAP tagging

Hi all, I am planning on working with miniscopes in the future and would like some input. Hope

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Miniscope & TRAP tagging

Hi all, I am planning on working with miniscopes in the future and would like some input. Hope

Dec 4

alexis.fa...@gmail.com, … Rafa Olivares5

Dec 4

Issue regarding V4 and Minicam

Hello Federico. How can I increase the FPS in the Minicam? I've already changed the binary values

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Issue regarding V4 and Minicam

Hello Federico. How can I increase the FPS in the Minicam? I've already changed the binary values

Dec 4

Daniel Robert Griffiths, … Federico Sangiuliano16

Nov 22

Ringing artifact?

The fix is to unfortunately replace the PCB as the damage might be in between layers. On Friday,

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Ringing artifact?

The fix is to unfortunately replace the PCB as the damage might be in between layers. On Friday,

Nov 22

Nov 16

Dopamine Release Imaging In Miniscope

Hi to all, I am looking for people who image the neurotransmitter release with miniscope+GRIN lenses+

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Dopamine Release Imaging In Miniscope

Hi to all, I am looking for people who image the neurotransmitter release with miniscope+GRIN lenses+

Nov 16

Nov 15

Imaging cortical layer 2/3 and 5 with miniscope V4

Hi everyone, I am trying to image cortical layer 2/3 and 5 with the miniscope V4, and I still have

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Imaging cortical layer 2/3 and 5 with miniscope V4

Hi everyone, I am trying to image cortical layer 2/3 and 5 with the miniscope V4, and I still have

Nov 15

Anna Teruel, … Atharv Panditrao4

Nov 15

Minian jupyter notebook not displaying videos, but a frozen frame.

Just run: !pip install pyviz_comms==2.0.2! On Thursday, October 31, 2024 at 4:53:28 AM UTC-7 Ella

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Minian jupyter notebook not displaying videos, but a frozen frame.

Just run: !pip install pyviz_comms==2.0.2! On Thursday, October 31, 2024 at 4:53:28 AM UTC-7 Ella

Nov 15

Ana Carolina Bottura de Barros, Rafa Olivares2

Oct 21

Can MiniCAM image whiskers?

Hello Ana. Could you image whiskers whit the MiniCAM? Best. El lunes, 28 de febrero de 2022 a las 8:

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Can MiniCAM image whiskers?

Hello Ana. Could you image whiskers whit the MiniCAM? Best. El lunes, 28 de febrero de 2022 a las 8:

Oct 21

Shahrzad Shiravi, Rafa Olivares2

Oct 21

Increasing fps to get dimmer images

Hello Shahrzad. Could you increase the FPS changing the json file? Best. El miércoles, 3 de mayo de

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Increasing fps to get dimmer images

Hello Shahrzad. Could you increase the FPS changing the json file? Best. El miércoles, 3 de mayo de

Oct 21

Oct 18

Inscopix Baseplate Cover Issue

Hello! I am using the Inscopix nVista Minscopes for some Pavlovian Fear Conditioning studies and am

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Inscopix Baseplate Cover Issue

Hello! I am using the Inscopix nVista Minscopes for some Pavlovian Fear Conditioning studies and am

Oct 18

Sep 26

Auxiliary input port on Miniscope DAQ v3.3

Hi there, I'm finding ways to record the timestamps of digital signals from an Arduino Due board

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Auxiliary input port on Miniscope DAQ v3.3

Hi there, I'm finding ways to record the timestamps of digital signals from an Arduino Due board

Sep 26

Sep 19

Open-Source Itinerary for SfN

The OpenBehavior project is organizing an itinerary of presentations using open-source tools at the

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Open-Source Itinerary for SfN

The OpenBehavior project is organizing an itinerary of presentations using open-source tools at the

Sep 19

Sep 19

Gofoton grin lenses

Does anyone have any recent thoughts on Gofoton GRIN lenses? We're working on getting the

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Gofoton grin lenses

Does anyone have any recent thoughts on Gofoton GRIN lenses? We're working on getting the

Sep 19

Gabrielle Winters Bostwick

Sep 16

Invertebrate tissues: cell sizes and autofluorescence

Hello Everyone, I am new to using Miniscopes and would be interested to learn if anyone has attempted

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Invertebrate tissues: cell sizes and autofluorescence

Hello Everyone, I am new to using Miniscopes and would be interested to learn if anyone has attempted

Sep 16

Vicky H, … Erik Misak3

Aug 26

0.5 GRIN lens with V4 miniscopes

Hi Victoria, I only use Miniscope V4.4, but the GRIN lenses are 1.0mm and 0.5mm. Thus I also noticed

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0.5 GRIN lens with V4 miniscopes

Hi Victoria, I only use Miniscope V4.4, but the GRIN lenses are 1.0mm and 0.5mm. Thus I also noticed

Aug 26

Anew Fonnapat, Federico Sangiuliano2

Aug 26

Minian error: "Don't know how to convert {0} to RGB"

Hello Anew. Which compression did you use for your miniscope recording? On Tuesday, August 13, 2024

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Minian error: "Don't know how to convert {0} to RGB"

Hello Anew. Which compression did you use for your miniscope recording? On Tuesday, August 13, 2024

Aug 26

Aug 19

Your Feedback Needed: Help Shape the Future of Miniscope Technology!

Dear Miniscope Community, We're reaching out to gather your valuable feedback on the use of

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Your Feedback Needed: Help Shape the Future of Miniscope Technology!

Dear Miniscope Community, We're reaching out to gather your valuable feedback on the use of

Aug 19

Aug 13

ImportError, unable to import markup from jinja2

Hi all, I am currently going through the minian pipeline for the first time, the third cell is coming

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ImportError, unable to import markup from jinja2

Hi all, I am currently going through the minian pipeline for the first time, the third cell is coming

Aug 13

Watthanar Nirathasin

Aug 13

Chance to win a FREE Miniscope!

Hello everyone! MetaCell is conducting a survey aiming to provide insights on possible directions for

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Chance to win a FREE Miniscope!

Hello everyone! MetaCell is conducting a survey aiming to provide insights on possible directions for

Aug 13

Yhadan Mahedone

Aug 13

MiniAn: GCs video analysis

Hello Everyone, I'm writing with regard to granule cells (GCs) analysis, because I got stucked

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MiniAn: GCs video analysis

Hello Everyone, I'm writing with regard to granule cells (GCs) analysis, because I got stucked

Aug 13

Aug 13

new V4, how to protect miniscope

Hi! I was previously using the V3 miniscope which has housing shell/cover to protect the PCB. Does

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new V4, how to protect miniscope

Hi! I was previously using the V3 miniscope which has housing shell/cover to protect the PCB. Does

Aug 13

Gabrielle Siemonsmeier

Aug 2

Imaging astrocytes?

Hi all, Has anyone used a UCLA miniscope to successfully image calcium dynamics in astrocytes/

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Imaging astrocytes?

Hi all, Has anyone used a UCLA miniscope to successfully image calcium dynamics in astrocytes/

Aug 2

Jul 28

Cracked lens and possible debris between lens

Hello everyone, I'm wondering if anyone has a tutorial (possibly a video) on how to disassemble

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Cracked lens and possible debris between lens

Hello everyone, I'm wondering if anyone has a tutorial (possibly a video) on how to disassemble

Jul 28

Jul 25

Light smear, glare, flare? on new OEPS miniscopes v4.4.

Hey All, Two of my new OEPS Miniscopes have similar light glare/smearing issue. It doesn't seem

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Light smear, glare, flare? on new OEPS miniscopes v4.4.

Hey All, Two of my new OEPS Miniscopes have similar light glare/smearing issue. It doesn't seem

Jul 25

Hannah Muana, Daniel Aharoni3

Jul 22

LFOV/MiniCAM CMOS

Hello Daniel, Thanks for your reply! I immediately checked it and found out that they are only

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LFOV/MiniCAM CMOS

Hello Daniel, Thanks for your reply! I immediately checked it and found out that they are only

Jul 22

cke...@gmail.com, … Daniel Aharoni3

Jul 18

sudden spam influx?

Yep. Sorry about all of this spam! I think I finally got a handle on blocking it. Should be good from

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sudden spam influx?

Yep. Sorry about all of this spam! I think I finally got a handle on blocking it. Should be good from

Jul 18

Jul 18

Recent spam issues on Miniscope Google Groups

Hello Everyone, I apologize for the recent ~1000 messages of spam per day that were being posted on

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Recent spam issues on Miniscope Google Groups

Hello Everyone, I apologize for the recent ~1000 messages of spam per day that were being posted on

Jul 18

William Mau, … Maria Gueidão Costa28

Jul 15

Misaligned "striping" on V4 images

Hey everyone, I wonder if, in the meantime, anyone has found a solution for analyzing data with this

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Misaligned "striping" on V4 images

Hey everyone, I wonder if, in the meantime, anyone has found a solution for analyzing data with this

Jul 15

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