Miniscope

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Welcome to the Miniscope Google Group! Here you can discuss all things related to miniature microscopy and the UCLA Miniscope project.

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Ignacio Marin, … Daniel Aharoni4

Jan 12

msCam frame retrieve error 3 leds on

Hi Daniel, Thanks for your reply and sorry for the delay. I tried with the new software and also a

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msCam frame retrieve error 3 leds on

Hi Daniel, Thanks for your reply and sorry for the delay. I tried with the new software and also a

Jan 12

Roman Doronin, … earthw...@gmail.com10

Jan 12

Cheap active commutator + basic miniscope software in Labview

Dear Roman Aha, that was the one point that I need. Now I confirmed that the code successfully work

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Cheap active commutator + basic miniscope software in Labview

Dear Roman Aha, that was the one point that I need. Now I confirmed that the code successfully work

Jan 12

Zihui Zhang, Federico Sangiuliano5

Jan 11

cannula for thin, long GRIN lenses

Thank you so much, Federico! The video is super-helpful. She mentioned there is a grin lens holder (

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cannula for thin, long GRIN lenses

Thank you so much, Federico! The video is super-helpful. She mentioned there is a grin lens holder (

Jan 11

ph.va...@gmail.com, Federico Sangiuliano3

Jan 8

Saving minian output as a matlab file

Thank you, Federico, worked like a charm, it's exactly what I was looking for! Kind regards, PV

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Saving minian output as a matlab file

Thank you, Federico, worked like a charm, it's exactly what I was looking for! Kind regards, PV

Jan 8

Sabrina Benas, Daniel Aharoni2

Jan 7

Issues integrating DeepLabCut with the software

Hi and sorry for the slow response. Have you made sure you have a fully functioning deeplabcut-live

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Issues integrating DeepLabCut with the software

Hi and sorry for the slow response. Have you made sure you have a fully functioning deeplabcut-live

Jan 7

Sylar Grayson, Daniel Aharoni2

Jan 7

Horizontal lines and EWL module

Hi and sorry for the slow response! Yep this definitely looks like the EWL driver if drawing way too

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Horizontal lines and EWL module

Hi and sorry for the slow response! Yep this definitely looks like the EWL driver if drawing way too

Jan 7

Naoki Tomita, Daniel Aharoni2

Jan 7

Regarding the trigger output of DAQ

Hi. Sorry for the delay in responding. Unfortunately this isn't directly possible. The Miniscope

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Regarding the trigger output of DAQ

Hi. Sorry for the delay in responding. Unfortunately this isn't directly possible. The Miniscope

Jan 7

Meow, … Daniel Aharoni8

12/17/21

60 FPS with V4?

Hi Ian, I think it sounds like the PLL is not fully being enabled here. If the PPL is properly

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60 FPS with V4?

Hi Ian, I think it sounds like the PLL is not fully being enabled here. If the PPL is properly

12/17/21

Miguel Carvalho, … Daniel Aharoni13

12/17/21

Behavior Camera + V4 Imaging Synchronization

Hi, I am not sure I fully understand your setup. How does the Miniscope trigger your behavioral

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Behavior Camera + V4 Imaging Synchronization

Hi, I am not sure I fully understand your setup. How does the Miniscope trigger your behavioral

12/17/21

Simon Fisher, Federico Sangiuliano2

12/16/21

MiniCam example

Hello Simon. I have recently used the miniCAM for a long recording in a low light environment. I didn

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MiniCam example

Hello Simon. I have recently used the miniCAM for a long recording in a low light environment. I didn

12/16/21

Florian S, … xiaoyu peng8

12/14/21

Imaging of interneurons

Here it is, imaged by V3. I downsampled and enhanced brightness in image J. PV neurons seem to be

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Imaging of interneurons

Here it is, imaged by V3. I downsampled and enhanced brightness in image J. PV neurons seem to be

12/14/21

Gabrielle Siemonsmeier, … Federico Sangiuliano13

12/10/21

Computer specs for multiple parallel recordings

Hi Federico, Thanks so much for your answer! yeah it's an SSD, I've already run into the

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Computer specs for multiple parallel recordings

Hi Federico, Thanks so much for your answer! yeah it's an SSD, I've already run into the

12/10/21

Ekata Mitra, Daniel Aharoni2

12/9/21

Can we image without DAQ system?

Hi Ekata, Unfortunately it is not possible to acquire Miniscope data without the Miniscope DAQ. Maybe

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Can we image without DAQ system?

Hi Ekata, Unfortunately it is not possible to acquire Miniscope data without the Miniscope DAQ. Maybe

12/9/21

Masurkar Lab, Daniel Aharoni2

12/8/21

Miniscope V4 & Go!Foton Lenses

Hello Isabel, In general we think Grintech (sold by Inscopix) lenses perform a bit better than

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Miniscope V4 & Go!Foton Lenses

Hello Isabel, In general we think Grintech (sold by Inscopix) lenses perform a bit better than

12/8/21

George Foustoukos

12/5/21

0.5mm GRIN Lens holder for implantation

Hello Do you know where can I find the 3D printing files for the GRIN Lens holder Susie use for

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0.5mm GRIN Lens holder for implantation

Hello Do you know where can I find the 3D printing files for the GRIN Lens holder Susie use for

12/5/21

Alan, Susie Yu Feng3

12/4/21

V4 miniscope holder

Hi Susie, Thanks for the prompt help with awesome pictures! I didn't think about attaching the

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V4 miniscope holder

Hi Susie, Thanks for the prompt help with awesome pictures! I didn't think about attaching the

12/4/21

zahra rezaei, … Andrew Hardaway8

12/2/21

Hi Ana, Awesome! Thanks for the feedback. I went ahead and purchased from Neurotek, - $675 with a 3-4

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Hi Ana, Awesome! Thanks for the feedback. I went ahead and purchased from Neurotek, - $675 with a 3-4

12/2/21

Ashley Choi, Daniel Aharoni3

11/29/21

Miniscope v4 timestamp

Great, thank you! On Monday, November 15, 2021 at 12:49:45 PM UTC-5 dbah...@gmail.com wrote: Hi

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Miniscope v4 timestamp

Great, thank you! On Monday, November 15, 2021 at 12:49:45 PM UTC-5 dbah...@gmail.com wrote: Hi

11/29/21

Ling WANG, … Daniel Aharoni7

11/16/21

How to connect the scope using the software

Hi Daniel, Thank you for your replies very much. 1. Here are the pictures of our DAQ. 2. During

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How to connect the scope using the software

Hi Daniel, Thank you for your replies very much. 1. Here are the pictures of our DAQ. 2. During

11/16/21

Mark Sanders, … Daniel Aharoni4

11/15/21

How to solder coax cable set? And miniscope.org website down

Thanks for the heads up on miniscope.org being down. I am working on that now. We have migrated most

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How to solder coax cable set? And miniscope.org website down

Thanks for the heads up on miniscope.org being down. I am working on that now. We have migrated most

11/15/21

Maria Costa, Daniel Aharoni2

11/15/21

Commutator to ULCA Miniscope V3

Hi Maria, I suggest searching this google group for posts discussing commutators as there is already

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Commutator to ULCA Miniscope V3

Hi Maria, I suggest searching this google group for posts discussing commutators as there is already

11/15/21

Ana Gonçalves, … dsp4

11/12/21

Excitation at GCaMP6f isosbestic point

So this data was taken by a friend, and is not peer reviewed, but so take it at your own peril. But

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Excitation at GCaMP6f isosbestic point

So this data was taken by a friend, and is not peer reviewed, but so take it at your own peril. But

11/12/21

Md. Mamun Al-Amin, … Wenjian SUN7

11/5/21

GRIN Lens Implantation

Hi Omid, Thanks for your advice. Best, Wenjian omid yaghmazadeh <omid.yaghmazadeh@gmail.com> 于

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GRIN Lens Implantation

Hi Omid, Thanks for your advice. Best, Wenjian omid yaghmazadeh <omid.yaghmazadeh@gmail.com> 于

11/5/21

Chris Adam, … Daniel Aharoni6

11/4/21

Miniscopes No Longer Connecting - No Blue LED

Thanks for the update Chris. This sounds very much like a damaged L13 inductor. Sometime you can

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Miniscopes No Longer Connecting - No Blue LED

Thanks for the update Chris. This sounds very much like a damaged L13 inductor. Sometime you can

11/4/21

Mike Schaid, Daniel Aharoni3

10/29/21

CAD file for baseplate insert

Just following up on this. Shylo Stiteler, the machinist that produces pretty much Miniscope machined

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CAD file for baseplate insert

Just following up on this. Shylo Stiteler, the machinist that produces pretty much Miniscope machined

10/29/21

Ashley Choi, Daniel Aharoni2

10/28/21

Miniscope v4 Electrical Noise

Hi Ashley, This is very interesting. Can you tell me a bit more about the noise you are seeing?

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Miniscope v4 Electrical Noise

Hi Ashley, This is very interesting. Can you tell me a bit more about the noise you are seeing?

10/28/21

Clément Pouget, Daniel Aharoni2

10/28/21

Wire-free miniscope SD card issue

Hello, The Miniscope Project and my lab do not directly sell anything ourselves. Can you tell me

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Wire-free miniscope SD card issue

Hello, The Miniscope Project and my lab do not directly sell anything ourselves. Can you tell me

10/28/21

Jon, … Daniel Aharoni11

10/28/21

Compatiable with Open-ephys

Hi Naoki, A color image sensor uses a Bayer pattern of red, green, and blue filters on top of the

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Compatiable with Open-ephys

Hi Naoki, A color image sensor uses a Bayer pattern of red, green, and blue filters on top of the

10/28/21

Rob Ellingford, Daniel Aharoni3

10/20/21

Positioning of GRIN relay lens for imaging of the CA1

Thank you Daniel. Very helpful things for me to try out On Wednesday, October 6, 2021 at 10:05:54 PM

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Positioning of GRIN relay lens for imaging of the CA1

Thank you Daniel. Very helpful things for me to try out On Wednesday, October 6, 2021 at 10:05:54 PM

10/20/21

César Acevedo-Triana, … earthw...@gmail.com4

10/15/21

Basler USB 3.0 camera as behavior camera

Hi Cesar Hi. I am currently using Basler camera w/ miniscope recording. Using NI board, I send TTL to

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Basler USB 3.0 camera as behavior camera

Hi Cesar Hi. I am currently using Basler camera w/ miniscope recording. Using NI board, I send TTL to

10/15/21

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