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Welcome to the Miniscope Google Group! Here you can discuss all things related to miniature microscopy and the UCLA Miniscope project.
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JIAXIN FU
Sep 26
Auxiliary input port on Miniscope DAQ v3.3
Hi there, I'm finding ways to record the timestamps of digital signals from an Arduino Due board
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Auxiliary input port on Miniscope DAQ v3.3
Hi there, I'm finding ways to record the timestamps of digital signals from an Arduino Due board
Sep 26
Open Behavior
Sep 19
Open-Source Itinerary for SfN
The OpenBehavior project is organizing an itinerary of presentations using open-source tools at the
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Open-Source Itinerary for SfN
The OpenBehavior project is organizing an itinerary of presentations using open-source tools at the
Sep 19
Jeff Jones
Sep 19
Gofoton grin lenses
Does anyone have any recent thoughts on Gofoton GRIN lenses? We're working on getting the
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Gofoton grin lenses
Does anyone have any recent thoughts on Gofoton GRIN lenses? We're working on getting the
Sep 19
Gabrielle Winters Bostwick
Sep 16
Invertebrate tissues: cell sizes and autofluorescence
Hello Everyone, I am new to using Miniscopes and would be interested to learn if anyone has attempted
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Invertebrate tissues: cell sizes and autofluorescence
Hello Everyone, I am new to using Miniscopes and would be interested to learn if anyone has attempted
Sep 16
Vicky H
, …
Erik Misak
3
Aug 26
0.5 GRIN lens with V4 miniscopes
Hi Victoria, I only use Miniscope V4.4, but the GRIN lenses are 1.0mm and 0.5mm. Thus I also noticed
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0.5 GRIN lens with V4 miniscopes
Hi Victoria, I only use Miniscope V4.4, but the GRIN lenses are 1.0mm and 0.5mm. Thus I also noticed
Aug 26
Anew Fonnapat
,
Federico Sangiuliano
2
Aug 26
Minian error: "Don't know how to convert {0} to RGB"
Hello Anew. Which compression did you use for your miniscope recording? On Tuesday, August 13, 2024
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Minian error: "Don't know how to convert {0} to RGB"
Hello Anew. Which compression did you use for your miniscope recording? On Tuesday, August 13, 2024
Aug 26
Daniel Aharoni
Aug 19
Your Feedback Needed: Help Shape the Future of Miniscope Technology!
Dear Miniscope Community, We're reaching out to gather your valuable feedback on the use of
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Your Feedback Needed: Help Shape the Future of Miniscope Technology!
Dear Miniscope Community, We're reaching out to gather your valuable feedback on the use of
Aug 19
Gary Urry
Aug 13
ImportError, unable to import markup from jinja2
Hi all, I am currently going through the minian pipeline for the first time, the third cell is coming
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ImportError, unable to import markup from jinja2
Hi all, I am currently going through the minian pipeline for the first time, the third cell is coming
Aug 13
Watthanar Nirathasin
Aug 13
Chance to win a FREE Miniscope!
Hello everyone! MetaCell is conducting a survey aiming to provide insights on possible directions for
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Chance to win a FREE Miniscope!
Hello everyone! MetaCell is conducting a survey aiming to provide insights on possible directions for
Aug 13
Yhadan Mahedone
Aug 13
MiniAn: GCs video analysis
Hello Everyone, I'm writing with regard to granule cells (GCs) analysis, because I got stucked
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MiniAn: GCs video analysis
Hello Everyone, I'm writing with regard to granule cells (GCs) analysis, because I got stucked
Aug 13
Katherine Day
Aug 13
new V4, how to protect miniscope
Hi! I was previously using the V3 miniscope which has housing shell/cover to protect the PCB. Does
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new V4, how to protect miniscope
Hi! I was previously using the V3 miniscope which has housing shell/cover to protect the PCB. Does
Aug 13
Gabrielle Siemonsmeier
Aug 2
Imaging astrocytes?
Hi all, Has anyone used a UCLA miniscope to successfully image calcium dynamics in astrocytes/
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Imaging astrocytes?
Hi all, Has anyone used a UCLA miniscope to successfully image calcium dynamics in astrocytes/
Aug 2
Jeviko Liongky
Jul 28
Cracked lens and possible debris between lens
Hello everyone, I'm wondering if anyone has a tutorial (possibly a video) on how to disassemble
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Cracked lens and possible debris between lens
Hello everyone, I'm wondering if anyone has a tutorial (possibly a video) on how to disassemble
Jul 28
Kevin Coffey
Jul 25
Light smear, glare, flare? on new OEPS miniscopes v4.4.
Hey All, Two of my new OEPS Miniscopes have similar light glare/smearing issue. It doesn't seem
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Light smear, glare, flare? on new OEPS miniscopes v4.4.
Hey All, Two of my new OEPS Miniscopes have similar light glare/smearing issue. It doesn't seem
Jul 25
Hannah Muana
,
Daniel Aharoni
3
Jul 22
LFOV/MiniCAM CMOS
Hello Daniel, Thanks for your reply! I immediately checked it and found out that they are only
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LFOV/MiniCAM CMOS
Hello Daniel, Thanks for your reply! I immediately checked it and found out that they are only
Jul 22
cke...@gmail.com
, …
Daniel Aharoni
3
Jul 18
sudden spam influx?
Yep. Sorry about all of this spam! I think I finally got a handle on blocking it. Should be good from
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sudden spam influx?
Yep. Sorry about all of this spam! I think I finally got a handle on blocking it. Should be good from
Jul 18
Daniel Aharoni
Jul 18
Recent spam issues on Miniscope Google Groups
Hello Everyone, I apologize for the recent ~1000 messages of spam per day that were being posted on
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Recent spam issues on Miniscope Google Groups
Hello Everyone, I apologize for the recent ~1000 messages of spam per day that were being posted on
Jul 18
William Mau
, …
Maria Gueidão Costa
28
Jul 15
Misaligned "striping" on V4 images
Hey everyone, I wonder if, in the meantime, anyone has found a solution for analyzing data with this
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Misaligned "striping" on V4 images
Hey everyone, I wonder if, in the meantime, anyone has found a solution for analyzing data with this
Jul 15
Dechuan Sun
, …
Daniel Aharoni
9
Jul 9
LED
The V4 optics are chromatic ally corrected and shouldn't have any noticeable focal shift due to
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LED
The V4 optics are chromatic ally corrected and shouldn't have any noticeable focal shift due to
Jul 9
Jeviko Liongky
Jul 5
Troubleshooting lens problem
Dear there, I noticed some debris and possible cracking in my self-assembly miniscope (picture
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Troubleshooting lens problem
Dear there, I noticed some debris and possible cracking in my self-assembly miniscope (picture
Jul 5
Naoki Tomita
2
Jun 12
Flickering of video data
Dear there, As we found it difficult to discern the screen flicker from the video submitted alone, we
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Flickering of video data
Dear there, As we found it difficult to discern the screen flicker from the video submitted alone, we
Jun 12
Naoki Tomita
Jun 10
On recording on miniscope
Dear there, When recording for longer periods of time on Miniscope, we noticed that the entire screen
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On recording on miniscope
Dear there, When recording for longer periods of time on Miniscope, we noticed that the entire screen
Jun 10
Josue Regalado
, …
Federico Sangiuliano
5
Jun 9
Longer USB cable
Hello Josue. You could try this active USB extender: https://www.mouser.com/ProductDetail/Basler/
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Longer USB cable
Hello Josue. You could try this active USB extender: https://www.mouser.com/ProductDetail/Basler/
Jun 9
Hala Kezil
,
Federico Sangiuliano
2
Jun 9
Retrieve frame failed
Hello Hala. In the smaller arenas, are you using the commutator? How long is your coaxial cable? On
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Retrieve frame failed
Hello Hala. In the smaller arenas, are you using the commutator? How long is your coaxial cable? On
Jun 9
adrienne kinman
2
Jun 5
V4 optics questions
Sorry - have found the magnification of the v4 scope buried in the discussion board - it is 2-3x for
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V4 optics questions
Sorry - have found the magnification of the v4 scope buried in the discussion board - it is 2-3x for
Jun 5
Henry Lester
,
Daniel Robert Griffiths
3
Jun 1
Photometer, low duty-cycle mode
There is, indeed, some Bonsai expertise at Caltech (my institution), so we'll ask around. In the
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Photometer, low duty-cycle mode
There is, indeed, some Bonsai expertise at Caltech (my institution), so we'll ask around. In the
Jun 1
Federico Sangiuliano
, …
Pranav Sawant
3
May 30
Re: Error while running minian pipeline on jupyter notebook
Hey! Yes this was resolved, you can refer to this https://github.com/denisecailab/minian/issues/266
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Re: Error while running minian pipeline on jupyter notebook
Hey! Yes this was resolved, you can refer to this https://github.com/denisecailab/minian/issues/266
May 30
Mitch de Snoo
May 30
V4 Focus Failures
I am experiencing focuses changes with some of my miniscope recordings, and I am currently out of
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V4 Focus Failures
I am experiencing focuses changes with some of my miniscope recordings, and I am currently out of
May 30
Two Dogs
May 22
Whant kind of GRIN LENS can be used for UCLA miniscope v4
Hello, I want to apply Grintech's relay GRIN LENS to UCLA miniscope v4 for CA1 imaging. But I am
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Whant kind of GRIN LENS can be used for UCLA miniscope v4
Hello, I want to apply Grintech's relay GRIN LENS to UCLA miniscope v4 for CA1 imaging. But I am
May 22
Daniel Robert Griffiths
,
Kapil Saxena
2
May 10
Help with Bonsai
Bonsai_group might be able to help. https://github.com/orgs/bonsai-rx/discussions On Thu, May 9, 2024
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Help with Bonsai
Bonsai_group might be able to help. https://github.com/orgs/bonsai-rx/discussions On Thu, May 9, 2024
May 10