Miniscope

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Welcome to the Miniscope Google Group! Here you can discuss all things related to miniature microscopy and the UCLA Miniscope project.

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Sep 15

Miniscope Customization - Camera, Lens, Emission filter

Dear all, I am using the latest version of the miniscope V4.4 for my specific application and I'm

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Miniscope Customization - Camera, Lens, Emission filter

Dear all, I am using the latest version of the miniscope V4.4 for my specific application and I'm

Sep 15

George Foustoukos, … Carolyn Mann4

Sep 8

0.5mm GRIN Lens holder for implantation

Hello, I was wondering if anyone has modified this lens holder design to fit into the j6 baseplate (

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0.5mm GRIN Lens holder for implantation

Hello, I was wondering if anyone has modified this lens holder design to fit into the j6 baseplate (

Sep 8

fro...@gmail.com, … Rob Graham8

Sep 7

Thy1-GCamp6 cortical imaging with miniscope V4

Hi Emmanouil, I'm not sure about other people's experience of using the miniscope just with a

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Thy1-GCamp6 cortical imaging with miniscope V4

Hi Emmanouil, I'm not sure about other people's experience of using the miniscope just with a

Sep 7

Sep 7

Assembly problems

Hi. I cant link the Miniscope4 with the white line, like in the picture. How do these two things

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Assembly problems

Hi. I cant link the Miniscope4 with the white line, like in the picture. How do these two things

Sep 7

A Suminski, … Myrto S3

Sep 4

Dual Color Miniscope

Hello, I was wondering if there are any further updates on the development of the 2-color miniscope.

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Dual Color Miniscope

Hello, I was wondering if there are any further updates on the development of the 2-color miniscope.

Sep 4

Sep 3

Re: FLIR behavior camera connection to V4

I would like to know the same. Thanks, Kapil On Wed, 30 Aug 2023, 03:34 Amit Koren, <amitk1@mail.

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Re: FLIR behavior camera connection to V4

I would like to know the same. Thanks, Kapil On Wed, 30 Aug 2023, 03:34 Amit Koren, <amitk1@mail.

Sep 3

Eric Melonakos2

Sep 1

Horizontal noise in image, EWL still works

Just to answer my own question, I started powering the DAQ with the DC jack, and it solved the

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Horizontal noise in image, EWL still works

Just to answer my own question, I started powering the DAQ with the DC jack, and it solved the

Sep 1

Arun Cherkkil, Federico Sangiuliano4

Aug 28

Are the DAQs cross compatible

Both DAQs (v3.2 from OEPS) and the v2.3 (from Labmaker) are both compatible with the v3 and v4

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Are the DAQs cross compatible

Both DAQs (v3.2 from OEPS) and the v2.3 (from Labmaker) are both compatible with the v3 and v4

Aug 28

Aug 28

Issues with DAQs v2.3

Hi , I have been trying to interface with 2 DAQs that I had bought from LABmaker. With one I am not

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Issues with DAQs v2.3

Hi , I have been trying to interface with 2 DAQs that I had bought from LABmaker. With one I am not

Aug 28

Eric Melonakos, … Albert hiuka fok11

Aug 25

Head orientation issues with software v1.11 and v1.10, but not 1.02

I've now tried a miniscope from Open Ephys and a miniscope from Labmaker (both v4.41), paired

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Head orientation issues with software v1.11 and v1.10, but not 1.02

I've now tried a miniscope from Open Ephys and a miniscope from Labmaker (both v4.41), paired

Aug 25

Fa Peng, Federico Sangiuliano3

Aug 24

Unable to save image to SD card with Wire-Free-DAQ

Hi Federico. The software we use is Atmel Studio. Currently, we are using miniscopeV4 to test

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Unable to save image to SD card with Wire-Free-DAQ

Hi Federico. The software we use is Atmel Studio. Currently, we are using miniscopeV4 to test

Aug 24

Carlos, Fa Peng3

Aug 18

miniscope cannot connect

Thanks for the reply, we have tested all the above but showed no issue. But we have discovered that

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miniscope cannot connect

Thanks for the reply, we have tested all the above but showed no issue. But we have discovered that

Aug 18

Jessica Froula, Federico Sangiuliano3

Aug 3

All cameras stopped collecting data without Miniscope DAQ software error

This was definitely the issue after many recordings over the last week and not removing the older

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All cameras stopped collecting data without Miniscope DAQ software error

This was definitely the issue after many recordings over the last week and not removing the older

Aug 3

Marek, … Nate Klett5

Aug 3

Minian Decay Times

Can someone explain to me what Minian's c0 matrix is? Are these the modelled fits of the

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Minian Decay Times

Can someone explain to me what Minian's c0 matrix is? Are these the modelled fits of the

Aug 3

Florian Steenbergen, … Zachary Zeidler4

Jul 28

I've tried both 7f and 8m in PFC, and ultimately went back to 7f after trying different 8m

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I've tried both 7f and 8m in PFC, and ultimately went back to 7f after trying different 8m

Jul 28

Jul 27

Analysis computer suggestions

Hi, Does anyone have suggestions for an analysis computer that could analyze Miniscope data in Minian

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Analysis computer suggestions

Hi, Does anyone have suggestions for an analysis computer that could analyze Miniscope data in Minian

Jul 27

Hannah Wirtshafter2

Jul 26

timestamps-- too many of them

in doing a little more processing, it looks like there are about the same number of "too large

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timestamps-- too many of them

in doing a little more processing, it looks like there are about the same number of "too large

Jul 26

Shahrzad Shiravi, Hannah Wirtshafter2

Jul 26

Changing EWL driver on flex PCB

are you sure its the driver and not the EWL lens? On Thursday, July 20, 2023 at 11:47:06 AM UTC-5 ssh

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Changing EWL driver on flex PCB

are you sure its the driver and not the EWL lens? On Thursday, July 20, 2023 at 11:47:06 AM UTC-5 ssh

Jul 26

Jul 24

Re: objective and relay grin lenses

Hi. - The V4 Miniscope only works with relay GRIN lenses. So only need to order relay GRINs. - Yes,

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Re: objective and relay grin lenses

Hi. - The V4 Miniscope only works with relay GRIN lenses. So only need to order relay GRINs. - Yes,

Jul 24

Nate Klett, … David Protter6

Jul 20

discussion of signal-to-noise

Some other thoughts that may be informative to the in vivo vs. ex vivo brain slice epi-fluorescent

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discussion of signal-to-noise

Some other thoughts that may be informative to the in vivo vs. ex vivo brain slice epi-fluorescent

Jul 20

Nicola Masala, … Pablo Vergara4

Jul 20

Hi Erik, Sorry for the late response. I inquired with the person who initially provided the

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Hi Erik, Sorry for the late response. I inquired with the person who initially provided the

Jul 20

Kevin Coffey, … Daniel Aharoni4

Jul 17

Favorite Compression Codec?

Perfect, thanks for the quick and thorough response! On Monday, July 17, 2023 at 1:18:52 PM UTC-7

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Favorite Compression Codec?

Perfect, thanks for the quick and thorough response! On Monday, July 17, 2023 at 1:18:52 PM UTC-7

Jul 17

Kyle Flippo, … Nate Klett5

Jul 17

Post Minian analysis

No problem, always happy to help a phellow Philadelphian! Unless I am mistaken, I believe that the C

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Post Minian analysis

No problem, always happy to help a phellow Philadelphian! Unless I am mistaken, I believe that the C

Jul 17

Jul 13

MiniAn: GCs video analysis

Hello Everyone, I'm writing with regard to granule cells (GCs) analysis, because I got stucked

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MiniAn: GCs video analysis

Hello Everyone, I'm writing with regard to granule cells (GCs) analysis, because I got stucked

Jul 13

Nikolas Karalis, … Eric Melonakos17

Jul 10

External TTL input

Hi, I'm seeing huge jumps in timeStamps.csv that do not correspond to dropped frames. I have a

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External TTL input

Hi, I'm seeing huge jumps in timeStamps.csv that do not correspond to dropped frames. I have a

Jul 10

Federico Sangiuliano, Shahrzad Shiravi2

Jul 3

Hi Federico, I recently encountered some issues with the EWL lens. I believe it was case 3. (The PCB

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Hi Federico, I recently encountered some issues with the EWL lens. I believe it was case 3. (The PCB

Jul 3

brice.de...@gmail.com, Ceci3

Jun 30

Open-source and affordable active commutator for Miniscope v4

Hi Jon and all! This is Ceci from Open Ephys. I came across your exchange and thought it might be

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Open-source and affordable active commutator for Miniscope v4

Hi Jon and all! This is Ceci from Open Ephys. I came across your exchange and thought it might be

Jun 30

Jun 29

Re: Digest for miniscope@googlegroups.com - 1 update in 1 topic

Anyone one knows the specifications for the power adapter for the "open ephys" DAQ v 3.3?

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Re: Digest for miniscope@googlegroups.com - 1 update in 1 topic

Anyone one knows the specifications for the power adapter for the "open ephys" DAQ v 3.3?

Jun 29

Jun 29

Ready to Use Coax Cables

Hi All, Just wanted to share here that the SMA to U.FL cables from this supplier work very well, at

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Ready to Use Coax Cables

Hi All, Just wanted to share here that the SMA to U.FL cables from this supplier work very well, at

Jun 29

Jun 26

interfacing openephys commutator with miniscope

Dear miniscope folks, I've recently purchased the openEphys commutator and have successfully

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interfacing openephys commutator with miniscope

Dear miniscope folks, I've recently purchased the openEphys commutator and have successfully

Jun 26

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