Running migrate with SNP data

[Lucas Freitas]

Hi all,

I'm running migrate with SNP data that I converted from VCF with vcfR package from R, the data is the variable sites only, but I'm getting an error in many loci, the error is appended to the end of the outfile and it says:

"Upper prior boundary seems too low!"

This run is just a test, so I'm gonna adjust some parameters but I would really appreciate any advise on how to proceed with this.

Downhere I'm putting examples of my data file, parmfile, outfile. I'm running migrate 3.6.11 that I installed from conda in a cluster that I'm using

[Peter Beerli]

Dear Lucas

(1) your migrate version is so outdated that I have stopped supporting that. From where did you get the conda package? I do not supply a conda package] 

(2) to get a newer version, goto to https://peterbeerli.com/migrate-html5 or directly to https://peterbeerli.com/migrate-html5/download_version4/

to look at a more recent version (5.x)

(3) 

"Upper prior boundary seems too low!"

you report a warning, not an error! {but your outfile seems faulty anyway. See (1,2)

Peter

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