Exporting cell boundaries as a mask

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Junsung Lee

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Feb 18, 2024, 5:24:23 PM2/18/24
to MicrobeJ Project
Hi all,

Does anyone know how to export cell boundaries as a binary mask?
I am trying to detect bacteria in a brightfield image and then use the brightfield-derived mask on a FITC image to measure the fluorescence intensity of cells within the mask.
I saw a note saying that exporting cell boundaries as a binary mask is possible in the beta version, but I could not find a way.
I  would appreciate your help.

Thank you.

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