Hi,
when trying to load files read using file.path() I repeatedly get an error message-
Received single location.
Error in if (!file.exists(location)) { : the condition has length > 1
I am using this function as mentioned in the user's manual.
My codes are-
myCHG=list("BF1.CHG.txt.gz","BGH2.CHG.txt.gz")
paths = file.path(getwd(), myCHG)
myobj = methRead(location = paths,
sample.id = c("BF1", "BGH2"),
pipeline = "bismarkCytosineReport",
context= "CHG",
assembly = "IWGSC RefSeq 2.1",
treatment = c(0,1), header = FALSE)
Can someone please help me to understand where I am making mistake(s)?
Thank you for your help in advance.
Regards
Arpit