Metatrans Forum

Dear Administrator, I hope this message finds you well. I am trying to download MetaTrans as

Dear Lisa, The contents of metatrans.org were migrated to https://manichanh.vhir.org/metatrans.org/

Buenas tardes, Escribo desde el grupo de Farmacogenómica y Genética vascular del IR Sant Pau,

Hello, I'm new to MetaTrans and would love to get going! Unfortunately the Databases link on the

Good morning. i am getting this error for my paired end data . The total discarded reads in the

Hi Giovanna, from a quick look, it seems like it is using the wrong version of Python. If I

Dear all, I'm Giovanna, and In july 2020 I used GSEA. Now I would like to download the gene set

Hi, I'm Giovanna and I have this error, when I run the test: ./metatrans #Checking pipeline files

I have the same problem. Do you have solved it? Thanks Giovanna Il giorno mercoledì 13 maggio 2020

Hi, I'm Giovanna and I'm running metatrans; but I have a problem: ./metatrans #Checking

Hi, I am trying to setup MetaTrans to be used on the cluster for our users. However, I don't see

Dear all, I am trying to do the mapping in MetaTrans with a more specific database for our study, it

Dear Haoya, Unfortunately we are no longer offering support for new environments. The error log

Hi Patricia, As you say, the input for the mapping file is this one (the clustered file): 3-MAP/m3-

Hi Nassir, Your issues seem related to software versions. MetaTrans was tested under Ubuntu 14.04 and

In log file I can see thqt this particular script caused the problem. "add_clustersize_to_fasta.

Traceback (most recent call last): File "/home/arbernard/galaxy_project/galaxy/lib/galaxy/jobs/

Hi Jaidev, Your error seems to be the same as the one described by "Dr. chandni sidhu" in

Hi Billy, We haven't had the opportunity to test the tool in your environment. Please make sure

Hello, If you are able to call "usearch" using " -cluster_fast" from the command

Hi Bob, This is not implemented in the published tool, but modifying the mapping/annotation scripts

Hi Magdy, Not sure if this is related to your error, but try to use "dash" instead of

I see that not many people have posted here recently, but hoping somebody sees this that could offer

Hi everyone, Just wondering if anyone has received this error recently? 0-Software/scripts/getMeta.py

Hi Helen, If this is the case, please read the instructions pointed two thread before " error

Hi Johannes, In the doc you will find a description of how to fill in the metadata table: http://

Hi Karen, A good starting point to debug this might be to test the sample dataset provided in the

Hi Roberto, Glad to know you found the cause of the error. As mentioned in a previous post we are not

Hi Bob, Unfortunately we don't have time/resources right now to test/fix your use case. As an

Thank you for your help, yes I am using a CentOS distribution so I'll make sure to check your