Crash when attempting to delete a Character

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Lewis Holmes

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Feb 10, 2026, 7:02:03 AMFeb 10
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Hello,

I was wondering if anyone knows why my program is crashing when I attempt to delete a Character from my Matrix. I have attached a screenshot of the Error message.

The path I take to delete a Character that results in the crash is as follows: select Character > Matrix > Delete Selected Chars or Taxa.
This same process works for deleting a Taxa, just not for a Character.

Thank you in advance,
LewisScreenshot 2026-02-10 115539.png

Wayne Maddison

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Feb 10, 2026, 6:59:23 PMFeb 10
to Mesquite Project
Thanks for your report, Lewis! Your crash was caused by a bug that was triggered if you have a morphological data file with annotations for the character state names, and you deleted a character. For version 4, we had made some deep changes to make character deletion thousands of times faster, for genomic data, but we forgot to check it for annotated states. 

I think we have a patch. Could you do the following to test it?
Download the file  4.02-Fix for DeletingCharsMorphWAnnot.zip
Unzip it, and you will find a ReadMe.txt file, with instructions.

Does that fix your crash?  If it does, we'll post the patch alongside the 4.02 release on GitHub.

Best wishes,
Wayne


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