Jul 05, 2018 9:02:42 PM au.edu.uq.imb.memesuite.updatedb.UpdateSequenceDB getInitialisedDatabase
INFO: Creating a new sqlite database /home/jieconlin3/meme_db/ucsc1/fasta_db.sqlite
Jul 05, 2018 9:02:42 PM au.edu.uq.imb.memesuite.updatedb.UpdateSequenceDB setupTables
INFO: Creating database tables.
Jul 05, 2018 9:02:43 PM au.edu.uq.imb.memesuite.updatedb.UpdateSequenceDB setupTables
INFO: Creating category table
Jul 05, 2018 9:02:43 PM au.edu.uq.imb.memesuite.updatedb.UpdateSequenceDB setupTables
INFO: Creating listing table
Jul 05, 2018 9:02:43 PM au.edu.uq.imb.memesuite.updatedb.UpdateSequenceDB setupTables
INFO: Creating sequence table
Jul 05, 2018 9:02:43 PM au.edu.uq.imb.memesuite.updatedb.UpdateSequenceDB setupTables
INFO: Creating priors table
Jul 05, 2018 9:02:43 PM au.edu.uq.imb.memesuite.updatedb.UpdateSequenceDB setupTables
INFO: Declaring the schema version
Jul 05, 2018 9:02:43 PM au.edu.uq.imb.memesuite.updatedb.UpdateSequenceDB setupTables
INFO: Successfully created database tables.
Jul 05, 2018 9:02:43 PM au.edu.uq.imb.memesuite.updatedb.UpdateSequenceDB purge
INFO: Purged database entries for 0 missing files as well as 0 empty listings and 0 empty categories. Also regenerated 0 background files.
Jul 05, 2018 9:02:43 PM au.edu.uq.imb.memesuite.updatedb.UpdateSequenceDB update
INFO: Started update of sequence databases in /home/jieconlin3/meme_db/ucsc1
Jul 05, 2018 9:02:43 PM au.edu.uq.imb.memesuite.updatedb.UCSCGenomeUpdater call
INFO: Starting UCSC update
Jul 05, 2018 9:02:44 PM au.edu.uq.imb.memesuite.updatedb.UCSCGenomeUpdater call
SEVERE: Failed parsing the genome releases from the FAQ... No genomes found!
Jul 05, 2018 9:02:44 PM au.edu.uq.imb.memesuite.updatedb.UpdateSequenceDB update
INFO: Finished update of sequence databases in /home/jieconlin3/meme_db/ucsc1
and when I ran update-sequence-db --ensembl, everything went right.