Recompile with larger MAXLO

[CharlesEGrant]

Originally posted by very human 01 Apr 2008

Hello, 
I am using the stand-alone version of MAST for predicting motifs in some yeast upstream sequences, and was wondering if someone could help me out on this issue. 

My problem is I keep getting the following error when I run MAST: 

Code:

Too many logodds matrices.  Recompile with larger MAXLO

I get the same error when I try to use the online server. 

I am using 123 log odds matrices in proper format as recommended. Can you help me sorting out this issue? Is there a way to scan my sequences using these 123 matrices without splitting the log-odds file? If no, what is the upper limit of the no. of matrices that can be used. 

I really appreciate your help on this.
_________________
veryhuman

[CharlesEGrant]

Originally posted by memento 16 Jan 2009

You can edit the file src/user.h 

Code:

#define MAXG 101                /* maximum number of motifs + 1 */

This is the same as MAXLO defined in src/logodds.h 

Code:

/* number of log-odds matrices allowed */  #define MAXLO MAXG