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陈嘉宇
Nov 7
How to build a ring detector in MCX? And some basic questions.
Dear Dr.Fang, I am a beginner using MCX. I am working on building a ring detector in MCX. However,
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How to build a ring detector in MCX? And some basic questions.
Dear Dr.Fang, I am a beginner using MCX. I am working on building a ring detector in MCX. However,
Nov 7
Carmel Auerbach
,
Fang, Qianqian
2
Nov 6
Help getting started with colin 27 simulations
Please post specific error messages related to the issue you encountered, including the version of
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Help getting started with colin 27 simulations
Please post specific error messages related to the issue you encountered, including the version of
Nov 6
Robin van Zutphen
, …
Matthew S
4
Nov 5
Potential speed increase
Dear Dr. Fang, My lab group is also working on a research project that requires a high volume of
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Potential speed increase
Dear Dr. Fang, My lab group is also working on a research project that requires a high volume of
Nov 5
IRENE
, …
Fang, Qianqian
5
Nov 5
Replay failed
Hi Andrea, cmake for mmc-trinity binaries are now fixed, see https://github.com/fangq/mmc/issues/105
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Replay failed
Hi Andrea, cmake for mmc-trinity binaries are now fixed, see https://github.com/fangq/mmc/issues/105
Nov 5
Alex Qiu
,
Fang, Qianqian
2
Nov 3
Is MCX Cloud supposed to be able to run the built-in simulations?
Hi Alex, Sorry for the long delay in getting back to you - this is a known issue. At some point in
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Is MCX Cloud supposed to be able to run the built-in simulations?
Hi Alex, Sorry for the long delay in getting back to you - this is a known issue. At some point in
Nov 3
SKYU
,
Fang, Qianqian
2
Nov 3
What is the maximum number of tissues??
MCX supports continuously varying media that is defined voxel by voxel. Please see this demo script
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What is the maximum number of tissues??
MCX supports continuously varying media that is defined voxel by voxel. Please see this demo script
Nov 3
Henry Liu
,
Fang, Qianqian
2
Nov 3
Simulation of Light Frequency
hi Henry, mcx currently does not directly run forward simulation of frequency-modulated light, it can
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Simulation of Light Frequency
hi Henry, mcx currently does not directly run forward simulation of frequency-modulated light, it can
Nov 3
Lei Fu
,
Qianqian Fang
2
Oct 24
Error: can't open output folder in MCX studio
hi Lei, you will have to run a simulation before the output folder is created - if the execution was
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Error: can't open output folder in MCX studio
hi Lei, you will have to run a simulation before the output folder is created - if the execution was
Oct 24
刘毅泽
, …
Qianqian Fang
4
Oct 24
Problem of opening files but can not load shapes
what you want to export to matlab? the simulation input file or output file? either way, in matlab,
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Problem of opening files but can not load shapes
what you want to export to matlab? the simulation input file or output file? either way, in matlab,
Oct 24
Dominic Hill
,
Qianqian Fang
5
Oct 9
Running MCX with a custom volume file - modifying the Colin27 template
Oh great! Many thanks for your help. I tried casting `data_dict.astype(np.uint16)` (I need more than
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Running MCX with a custom volume file - modifying the Colin27 template
Oh great! Many thanks for your help. I tried casting `data_dict.astype(np.uint16)` (I need more than
Oct 9
Brighten Pan
,
Qianqian Fang
5
Oct 9
Reduced Simulation Speed in MCXlab
from what you just described, I feel this is very likely caused by your OS/driver change instead of
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Reduced Simulation Speed in MCXlab
from what you just described, I feel this is very likely caused by your OS/driver change instead of
Oct 9
Zijian Deng
, …
Qianqian Fang
9
Sep 16
Simulation of photon propagation within digimouse
Dear Dr. Fang and Pauliina, Thanks so much for your valuable comments! I was assuming the unit for
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Simulation of photon propagation within digimouse
Dear Dr. Fang and Pauliina, Thanks so much for your valuable comments! I was assuming the unit for
Sep 16
Zr S
Sep 11
Simulation of bessel beam
Dear Dr. Fang, I am simulating the process of illuminating the pseudo-3D digital brain model. I put
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Simulation of bessel beam
Dear Dr. Fang, I am simulating the process of illuminating the pseudo-3D digital brain model. I put
Sep 11
Demián A. Vera
,
Qianqian Fang
3
Aug 22
Information printing
hi Demián, just to let yo know that I have added options in mcxlab/pmcx to suppress printing the mcx
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Information printing
hi Demián, just to let yo know that I have added options in mcxlab/pmcx to suppress printing the mcx
Aug 22
Demián A. Vera
,
Qianqian Fang
2
Aug 18
Scattering phase function
hi Demián, your code does not work because 2:pi:0.01:0 gives you an empty array. cfg.invcdf=invgauss(
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Scattering phase function
hi Demián, your code does not work because 2:pi:0.01:0 gives you an empty array. cfg.invcdf=invgauss(
Aug 18
Andrea Farina
,
Qianqian Fang
2
Aug 17
MMCLAB on Apple Silicon
hi Andrea, glad to hear from you. please see my reply on github https://github.com/fangq/mmc/issues/
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MMCLAB on Apple Silicon
hi Andrea, glad to hear from you. please see my reply on github https://github.com/fangq/mmc/issues/
Aug 17
adonald...@gmail.com
, …
Qianqian Fang
5
Aug 15
Replicating Photon Trajectories
Dr. Fang and Pauliina, Thank you for the explanation; that makes sense. I'll just run a single
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Replicating Photon Trajectories
Dr. Fang and Pauliina, Thank you for the explanation; that makes sense. I'll just run a single
Aug 15
Enes Menteşoğlu
,
Qianqian Fang
2
Aug 1
vol2surf exceeds array bound
hi Enes, this is rather an iso2mesh question. if you use cgalsurf as the method for vol2surf, you
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vol2surf exceeds array bound
hi Enes, this is rather an iso2mesh question. if you use cgalsurf as the method for vol2surf, you
Aug 1
Maurice
, …
Qianqian Fang
4
Jul 31
Can't find function mcx Matlab
hi Enes, you can't run mcx/mcxlab on M2 mac, because MCX needs NVIDIA GPU which M2 mac does not
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Can't find function mcx Matlab
hi Enes, you can't run mcx/mcxlab on M2 mac, because MCX needs NVIDIA GPU which M2 mac does not
Jul 31
Emily Wang
,
Qianqian Fang
8
Jul 30
Measuring light transmission and total attenuation
hi Emily, as I can't reproduce what you saw, I don't know what else I can do to help. please
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Measuring light transmission and total attenuation
hi Emily, as I can't reproduce what you saw, I don't know what else I can do to help. please
Jul 30
Alexa Nazarian
,
Qianqian Fang
2
Jul 30
Head Demo Questions
hi Alexa, please try setting cfg.issrcfrom0 to 1 and see that gives you what you wanted. the help
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Head Demo Questions
hi Alexa, please try setting cfg.issrcfrom0 to 1 and see that gives you what you wanted. the help
Jul 30
Q W
,
Qianqian Fang
13
Jul 30
error pop out when run mmc in Matlab
On 7/29/24 18:26, QW wrote: > Dear Dr Fang, > > Thank you for your time and patience! >
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error pop out when run mmc in Matlab
On 7/29/24 18:26, QW wrote: > Dear Dr Fang, > > Thank you for your time and patience! >
Jul 30
Andrew Berger
,
Qianqian Fang
12
Jul 22
converting mc2 to jnii
I set isoctave = 1 but I got a matlab error in my savejnifti when I did it (error file below). You
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converting mc2 to jnii
I set isoctave = 1 but I got a matlab error in my savejnifti when I did it (error file below). You
Jul 22
Josef Probst
, …
Qianqian Fang
11
Jul 19
mcxsvmc is not supported on Octave
hi Vincent, I installed octave 9.1 using this ppa on 22.04 https://launchpad.net/~ubuntuhandbook1/+
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mcxsvmc is not supported on Octave
hi Vincent, I installed octave 9.1 using this ppa on 22.04 https://launchpad.net/~ubuntuhandbook1/+
Jul 19
David Kelly
,
Qianqian Fang
2
Jul 17
Number of Photons Required for 100 Photons Detected
there is no formula to compute this because the probability of hitting the detector depends on almost
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Number of Photons Required for 100 Photons Detected
there is no formula to compute this because the probability of hitting the detector depends on almost
Jul 17
David Kelly
,
Qianqian Fang
2
Jul 9
Change Colours of Media in mcxpreview
hi David, mcxpreview() returns all graphic element handles. you can modify their properties
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Change Colours of Media in mcxpreview
hi David, mcxpreview() returns all graphic element handles. you can modify their properties
Jul 9
shakiba moradi
,
Qianqian Fang
3
Jul 8
Installing pmcxcl from nightly-build on M3 Mac
Dear Fang, Thank you for your guidance. I followed your instructions, and I was able to make it work.
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Installing pmcxcl from nightly-build on M3 Mac
Dear Fang, Thank you for your guidance. I followed your instructions, and I was able to make it work.
Jul 8
Qianqian Fang
Jul 3
Concluding MCX'24 training workshop
Dear friends, We had a wonderful 2-day MCX-fest at our Boston campus and it was wonderful seeing many
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Concluding MCX'24 training workshop
Dear friends, We had a wonderful 2-day MCX-fest at our Boston campus and it was wonderful seeing many
Jul 3
David Kelly
,
Qianqian Fang
2
Jul 3
Plotting Photon Trajectories
hi David, each entry in the trajectory data is not a full trajectory, but a single position (a
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Plotting Photon Trajectories
hi David, each entry in the trajectory data is not a full trajectory, but a single position (a
Jul 3
Matthew S
Jul 3
Simulating Crossed Polarizers
Hi Dr. Fang, I am using mcxlab to simulate an SFDI system which uses crossed polarizers on the
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Simulating Crossed Polarizers
Hi Dr. Fang, I am using mcxlab to simulate an SFDI system which uses crossed polarizers on the
Jul 3