Mass++

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Mass++ is freeware for mass spectrometry analysis that can be downloaded from

http://www.first-ms3d.jp/english/mass2

Mass++'s primary objectives are:

To support a wide range of vendors' data file formats.
To provide essential functionality for proteomics and metabolomics analysis.
T be easily extendible using plug-in technology.

Mass++ was originally funded by CREST (Core Research for Evolutional Science and Technology) and developed by Eisai. During that time, all the basic functionality and support for a wide range of data formats was implemented - Shimadzu (LCMSsolution, GCMSsolution), Applied Biosystems (Analyst, AnalystQS), Thermo Fisher (XCalibur), Waters (MassLynx), mzXML/mzML and MSB (original format).
Mass++ is now funded by FIRST (Funding Program for World-Leading Innovative R&D on Science and Technology), and Mass++ 2.0.0 development was taken over by Shimadzu Corporation with continued support from Eisai.

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5/8/15

MS2 data batch processing in Mass++ver2

Hi, Are there any guides or manuals available for MS2 data batch processing in Mass++ver2? I am

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MS2 data batch processing in Mass++ver2

Hi, Are there any guides or manuals available for MS2 data batch processing in Mass++ver2? I am

5/8/15

5/8/15

Retrieve compound info (ie. KEGG ID, m/z) using the Massbank ID in batches

Hi, Is it possible to retrieve compound info (ie. KEGG ID, m/z) using the Massbank ID in batches?

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Retrieve compound info (ie. KEGG ID, m/z) using the Massbank ID in batches

Hi, Is it possible to retrieve compound info (ie. KEGG ID, m/z) using the Massbank ID in batches?

5/8/15

Белякова Анастасия, satstnka3

4/30/15

Cannot open Xcalibur .raw files in Mass++

Thank you for your answer. Sorry, some how my answer did not appeared here. So, I have Windows 10

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Cannot open Xcalibur .raw files in Mass++

Thank you for your answer. Sorry, some how my answer did not appeared here. So, I have Windows 10

4/30/15

Белякова Анастасия

4/4/15

Xcalibur .raw files in Mass++

Cannot open Xcalibur .raw files in Mass++ so I have installed MSFilereader

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Xcalibur .raw files in Mass++

Cannot open Xcalibur .raw files in Mass++ so I have installed MSFilereader

4/4/15

1/21/15

Combining Multiple Scans

How can one integrate all the scans from a single .RAW file into a single spectrograph?

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Combining Multiple Scans

How can one integrate all the scans from a single .RAW file into a single spectrograph?

1/21/15

Ahmad Wibisana, satstnka2

10/5/14

Open MassLynx.raw

To reading Waters .raw data, MassLynx have to be installed in your PC because Mass++ read it using

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Open MassLynx.raw

To reading Waters .raw data, MassLynx have to be installed in your PC because Mass++ read it using

10/5/14

Brent Terry-Penak, … satstnka4

9/18/14

Cannot open Xcalibur .raw files in Mass++

Hello, Mass++ has the plug-in for reading Xcalibur data. So you can open it without developing

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Cannot open Xcalibur .raw files in Mass++

Hello, Mass++ has the plug-in for reading Xcalibur data. So you can open it without developing

9/18/14

Harminder Phull, … satstnka13

9/18/14

Cannot open .lcd file

Hello, I'm sorry for the late reply. I missed this message. Which version of you LCMSsolution? If

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Cannot open .lcd file

Hello, I'm sorry for the late reply. I missed this message. Which version of you LCMSsolution? If

9/18/14

yann.g...@gmail.com, satstnka3

5/27/14

mass++ under linux ?

Hi, Many thanks for your answer, Regards Yann Le mercredi 14 mai 2014 04:46:04 UTC+2, satstnka a

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mass++ under linux ?

Hi, Many thanks for your answer, Regards Yann Le mercredi 14 mai 2014 04:46:04 UTC+2, satstnka a

5/27/14

4/7/14

Displaying the position of cursor.

I forgot to mention about IronPython. IronPython has to be installed to use the Script Console.

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Displaying the position of cursor.

I forgot to mention about IronPython. IronPython has to be installed to use the Script Console.

4/7/14

Joao Paulo Pereira

3/24/14

Chromatographic analysis software in C#

Hello I'm trying to develop a software in C# that makes the detection of peaks in chromatograms

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Chromatographic analysis software in C#

Hello I'm trying to develop a software in C# that makes the detection of peaks in chromatograms

3/24/14

3/19/14

ESI-Orbitrap instrument

I could not find orbitrap instrument in the option. Is this machine not added? Which instrument can

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ESI-Orbitrap instrument

I could not find orbitrap instrument in the option. Is this machine not added? Which instrument can

3/19/14

3/5/14

Agilent data format

Mass++ ver 2.7.0 has been released yesterday although it was behind schedule. From this version, raw

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Agilent data format

Mass++ ver 2.7.0 has been released yesterday although it was behind schedule. From this version, raw

3/5/14

11/12/13

How to open heatmap or chromatogram from sample data without RT.

Iron Python has to be installed to use the script console. Download it from the following url: http:/

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How to open heatmap or chromatogram from sample data without RT.

Iron Python has to be installed to use the script console. Download it from the following url: http:/

11/12/13

bbmis...@gmail.com, satstnka2

10/1/13

Re: Mass++ Score & Hit Issues

Hi, I'm Satoshi Tanaka, one of Mass++ developers at Shimadzu Corporation. Thank you for using

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Re: Mass++ Score & Hit Issues

Hi, I'm Satoshi Tanaka, one of Mass++ developers at Shimadzu Corporation. Thank you for using

10/1/13

Rianne Fijten, … Darryl3

7/22/13

Export Xcalibur to .CDF format

Xcalibur has this function Sent from my iPhone On Jul 19, 2013, at 6:49 AM, Rianne Fijten <

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Export Xcalibur to .CDF format

Xcalibur has this function Sent from my iPhone On Jul 19, 2013, at 6:49 AM, Rianne Fijten <

7/22/13

Messer jorke, satstnka2

5/16/13

How to use X! Tandem for protein Identification?

Dear Messer jorke Hi. I'm Satoshi Tanaka, one of Mass++ developers at Shimadzu Corporation. Thank

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How to use X! Tandem for protein Identification?

Dear Messer jorke Hi. I'm Satoshi Tanaka, one of Mass++ developers at Shimadzu Corporation. Thank

5/16/13

11/26/12

Export of Peak list

Dear Kie, Thank you for using Mass++ and posting your question. I'm Satoshi Tanaka, one of the

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Export of Peak list

Dear Kie, Thank you for using Mass++ and posting your question. I'm Satoshi Tanaka, one of the

11/26/12

kai, Satoshi Tanaka4

9/7/12

Peak-width calculation by Mass++

Dear Kai, I'm glad to hear that you will come to the IMSC. I'll make a presentation about

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Peak-width calculation by Mass++

Dear Kai, I'm glad to hear that you will come to the IMSC. I'll make a presentation about

9/7/12

newcomer, satstnka2

7/4/12

file format to import peak position in Quantification

Hi, I'm Satoshi Tanaka, one of Mass++ developer. The file format to import into peak matrix is

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file format to import peak position in Quantification

Hi, I'm Satoshi Tanaka, one of Mass++ developer. The file format to import into peak matrix is

7/4/12

newcomer, satstnka2

5/30/12

Parameters for Identification in Batch Processing

Hi, Now, Mass++ supports only Mascot for identification, but it designed for supporting multiple

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Parameters for Identification in Batch Processing

Hi, Now, Mass++ supports only Mascot for identification, but it designed for supporting multiple

5/30/12

Mathilde Bossis, satstnka2

3/6/12

Problem to convert raw data to MassBank record

Dear Mathilde, Hello. I'm Satoshi Tanaka, one of the software developers of Mass++ at Shimadzu

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Problem to convert raw data to MassBank record

Dear Mathilde, Hello. I'm Satoshi Tanaka, one of the software developers of Mass++ at Shimadzu

3/6/12

9/16/11

Mass++ ver 2.0.0 is released.

Mass++ was originally funded by CREST (Core Research for Evolutional Science and Technology) and

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Mass++ ver 2.0.0 is released.

Mass++ was originally funded by CREST (Core Research for Evolutional Science and Technology) and

9/16/11

7/14/10

.qgd file could not open

I've installed Mass++ 1.7.4 on my computer, which has GCMSsolution from Shimadzu. When I tried to

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.qgd file could not open

I've installed Mass++ 1.7.4 on my computer, which has GCMSsolution from Shimadzu. When I tried to

7/14/10

4/6/10

Mass++ 1.7.4 is released

The new version of Mass++ is released today. You can get it from http://masspp.jp/ The update is as

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Mass++ 1.7.4 is released

The new version of Mass++ is released today. You can get it from http://masspp.jp/ The update is as

4/6/10

1/27/10

Mass++ 1.7.2 Released

The new version of Mass++ is released today. You can get it from http://masspp.jp/ The update is as

unread,

Mass++ 1.7.2 Released

The new version of Mass++ is released today. You can get it from http://masspp.jp/ The update is as

1/27/10

Amrutesh Puranik, Prem kumar2

11/24/09

mass spectroscopy database

Dear amrutesh S. Puranik I am also need same thing (Mass spectroscopy database). if you find anything

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mass spectroscopy database

Dear amrutesh S. Puranik I am also need same thing (Mass spectroscopy database). if you find anything

11/24/09

10/5/09

Version 1.7.0 Released

We are pleasure to release the new version of Mass++. Please access to http://masspp.jp The following

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Version 1.7.0 Released

We are pleasure to release the new version of Mass++. Please access to http://masspp.jp The following

10/5/09

9/23/09

Caution!! : About Spam

Recently, spam messages are frequently posted. Today, there was a message which recommended a

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Caution!! : About Spam

Recently, spam messages are frequently posted. Today, there was a message which recommended a

9/23/09

6/18/09

SMALL QUESTIONS/PROBLEMS

Hello, Thanks for uploading those manuals for differential comparison. Now things look much brighter.

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SMALL QUESTIONS/PROBLEMS

Hello, Thanks for uploading those manuals for differential comparison. Now things look much brighter.

6/18/09

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