Re: fail to download from github

[Jiang, Yuchao]

Which R version did you use, in what system? I just tried again and there’s no issue.

install.packages(c("falcon", "falconx", "devtools"))
if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")
BiocManager::install("WES.1KG.WUGSC", version = "3.8")
devtools::install_github(c("yuchaojiang/CODEX/package", "yuchaojiang/CODEX2/package", "yuchaojiang/Canopy/package", "zhouzilu/iCNV", "yuchaojiang/MARATHON/package"))

On Dec 29, 2018, at 10:19 AM, heka...@smu.edu.cn wrote:

Dear Yuchao,

Sorry for bothering you at this time of year, but I have the problem to download the R packages from your github. 

I received the message as below: 

devtools::install_github(c("yuchaojiang/CODEX2/package", "yuchaojiang/Canopy/package", "zhouzilu/iCNV", "yuchaojiang/MARATHON/package"))

Downloading GitHub repo yuchaojiang/CODEX2@master

Error in utils::download.file(url, path, method = download_method(), quiet = quiet,  : 

  cannot open URL 'https://api.github.com/repos/yuchaojiang/CODEX2/tarball/master'

Do you have any idea? 

Thank you very much for your attention.

Happy New Year!

Best,

Kai

----------------------------------

HE Kai

Postdoctoral fellow

Southern Medical University

hk20013...@163.com

hk20013...@gmail.com

[heka...@smu.edu.cn]

Dear Yuchao,

Many thanks for your reply. 
I'm under Windows10, using R 3.5.1 with Rstudio 1.1.456. 

I tried to install under Ubuntu 18 on another computer using R3.5.2 and Rstudio 1.1.463 which worked.

I guess it is irrelevant to your packages but the problem of R under Windows? 

Best wishes,

Kai

[Jiang, Yuchao]

I’m not sure. This has not been an issue for my windows PC. Maybe you should upgrade to 3.5.2

Sent from my iPhone