Installation (source)

[Ronnie Nelson]

It is necessary to build any R package from source on the Linux operating system. Also, some users may want to follow this procedure on OSX and Windows. The following command can be used to do so:

install.packages("MAPfastR", repos = c("http://CRAN.R-project.org", "http://R-Forge.R-project.org"), type="source")

Note that two repositories are called. This is because the MAPfastR package and the following dependencies are located on R-Forge: cnf2freq and cnf2freqibdtracer. The dependencies are located on CRAN and include: hglm,  lattice, MASS, Rcpp, noia, sfsmisc, snow, snowfall, dglm, statmod and Matrix.