[maker-devel] ERROR: Unknown strand in GFFDB::_sort_exons!

37 views
Skip to first unread message

Jingyin Yu

unread,
Nov 1, 2022, 5:32:04 PM11/1/22
to maker...@yandell-lab.org
Hello All,

I ran maker3 and got the error message, but did not get way how to solve it, 
##############################################
ERROR: Unknown strand in GFFDB::_sort_exons!
--> rank=NA, hostname=swift
ERROR: Failed while doing repeat masking
ERROR: Chunk failed at level:0, tier_type:1
FAILED CONTIG:chr1

ERROR: Chunk failed at level:2, tier_type:0
FAILED CONTIG:chr1

examining contents of the fasta file and run log
##############################################
I am not sure if you guys can give me some suggestions. Thanks a lot.

Best,
Jingyin

PostDoc, Boyce Thompson Institute for Plant Research​
Cornell University​
Ithaca, NY 14853​
Email: jy...@cornell.edu

Reply all
Reply to author
Forward
0 new messages