Traceback (most recent call last):
File "/Users/ruhi_naik/env/bin/majiq", line 5, in <module>
from majiq.run_majiq import main
File "/Users/ruhi_naik/env/lib/python3.7/site-packages/majiq/run_majiq.py", line 2, in <module>
from majiq.src.build import build
ImportError: dlopen(/Users/ruhi_naik/env/lib/python3.7/site-packages/majiq/src/build.cpython-37m-darwin.so, 2): Symbol not found: _GOMP_parallel
Referenced from: /Users/ruhi_naik/env/lib/python3.7/site-packages/majiq/src/build.cpython-37m-darwin.so
Expected in: flat namespace
in /Users/ruhi_naik/env/lib/python3.7/site-packages/majiq/src/build.cpython-37m-darwin.so
It seems I have to change the rpath in my setup.py file for gomp, but there is no setup.py file. I am trying to install a setup.py file, however, by running the command "python setup.py install", but that is giving an error as well (namely, python: can't open file 'setup.py': [Errno 2] No such file or directory).
Hope someone can help me out! Thank you in advance.
- Ruhi
CC=/usr/local/Cellar/gcc/11.2.0/bin/gcc-11 CXX=/usr/local/Cellar/gcc/11.2.0/bin/g++-11 pip install git+https://bitbucket.org/biociphers/majiq_stable.git#egg=majiq
Thanks,
Sean