I have a question about how the group mean psi values from the output of majiq dpsi were generated. I found that it is not an average of all the psi values of each sample generated from majiq psi. Both majiq psi and dpsi were run with default parameters. The samples were not grouped and they were treated as separated individuals when running majiq build. The group information were included in majiq dpsi stage.
Looking forward to your reply. Thanks in advance!