IndexError: index 3 is out of bounds for axis 0 with size 3

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Torstein Tengs

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Aug 21, 2024, 4:34:21 AMAug 21
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Hi!

I am trying to run the deltapsi command on some majiq files, but I get an error massage. All the bam files seem OK, and I can run PSI analyses fine.
majiq.png

Any suggestions?

Thanks!

-Torstein

San Jewell

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Aug 21, 2024, 3:51:25 PMAug 21
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Hi Torstein,

This is usually caused when some of the majiq files are from different builds. Please build all bam's or sj's together in one build so that the lsvs are a consensus first if you have not done so, this should resolve the issue.

Let me know if it makes sense,

-San

Torstein Tengs

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Aug 22, 2024, 8:32:20 AMAug 22
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Aha! Works great - thank you!

San Jewell

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Aug 22, 2024, 5:28:18 PMAug 22
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Awesome
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