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Darren Dale

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Jan 23, 2010, 7:50:13 AM1/23/10
to Methods for the analysis of hyperspectral image data
Updated comment on phynx software.

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Darren Dale

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Jan 23, 2010, 8:22:09 AM1/23/10
to Methods for the analysis of hyperspectral image data
Added description for python in "environments" section, updated
descriptions of h5py and pytables python packages.

Gerd Wellenreuther

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Jan 23, 2010, 8:53:48 AM1/23/10
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Thanks!

Armando: I am not sure whether and what to add for ViTables - since it
seems to be a part of PyTables. Any suggestion?

Cheers, Gerd

Darren Dale schrieb:

Francesc Alted

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Jan 23, 2010, 9:05:02 AM1/23/10
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A Saturday 23 January 2010 14:53:48 Gerd Wellenreuther escrigué:

> Thanks!
>
> Armando: I am not sure whether and what to add for ViTables - since it
> seems to be a part of PyTables. Any suggestion?

Nope. ViTables and PyTables are separate projects. It only happens that
ViTables uses PyTables to access HDF5 files and also takes advantage of the
PyTables features, like allowing fast selections in tables, or indexing.

More info about ViTables on its home page:

http://vitables.berlios.de/

Cheers,

--
Francesc Alted

Vicente Sole

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Jan 23, 2010, 9:27:07 AM1/23/10
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Hi Gerd,

Quoting Gerd Wellenreuther <Gerd.Well...@desy.de>:

> Thanks!
>
> Armando: I am not sure whether and what to add for ViTables - since it
> seems to be a part of PyTables. Any suggestion?
>

To me it looks as the (improved) python equivalent of HDF5viewer. A
pity they do not seem to supply stand-alone executables for testing or
to offer a real alternative to HDF5Viewer. Since they use PyQt as
PyMca does, probably they could use my very seem building mechanism.

I am even considering to embed some of its capabilities into PyMca or
(may be even simpler), to see if they provide any plugin system that
could be used to embed PyMca functionality into ViTables. From the
screenshots supplied in their web page, they seem to be able to make
more complex queries on the HDF5 files.

Armando

Vicente Sole

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Jan 23, 2010, 9:30:51 AM1/23/10
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Of course I meant "my very same" and not "my very seem" :-)

Quoting Vicente Sole <so...@esrf.fr>:

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Francesc Alted

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Jan 23, 2010, 10:16:57 AM1/23/10
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A Saturday 23 January 2010 15:27:07 Vicente Sole escrigué:

> Hi Gerd,
>
> Quoting Gerd Wellenreuther <Gerd.Well...@desy.de>:
> > Thanks!
> >
> > Armando: I am not sure whether and what to add for ViTables - since it
> > seems to be a part of PyTables. Any suggestion?
>
> To me it looks as the (improved) python equivalent of HDF5viewer. A
> pity they do not seem to supply stand-alone executables for testing or
> to offer a real alternative to HDF5Viewer.

You mean something for Windows? There is a Windows installer for ViTables in:

http://developer.berlios.de/project/showfiles.php?group_id=10366

> Since they use PyQt as
> PyMca does, probably they could use my very seem building mechanism.
>
> I am even considering to embed some of its capabilities into PyMca or
> (may be even simpler), to see if they provide any plugin system that
> could be used to embed PyMca functionality into ViTables. From the
> screenshots supplied in their web page, they seem to be able to make
> more complex queries on the HDF5 files.

Vicent Mas (the main author of ViTables) has just implemented a plug-in system
for ViTables. You will need the trunk version so as to use it, but you might
want to have it a try.

Cheers,

--
Francesc Alted

Vicente Sole

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Jan 23, 2010, 11:12:10 AM1/23/10
to ma...@googlegroups.com
Quoting Francesc Alted <fal...@pytables.org>:

> A Saturday 23 January 2010 15:27:07 Vicente Sole escrigué:

>> To me it looks as the (improved) python equivalent of HDF5viewer. A
>> pity they do not seem to supply stand-alone executables for testing or
>> to offer a real alternative to HDF5Viewer.
>
> You mean something for Windows? There is a Windows installer for
> ViTables in:
>
> http://developer.berlios.de/project/showfiles.php?group_id=10366
>

That's not a stand-alone program. It requires an end user installation
with Python25, PyQt, PyTables, etc. in order to get the program running.

I was talking more about what I do with PyMca: End users can use the
program without a Python installation and that works for Windows, Mac
and Linux.

>> Since they use PyQt as
>> PyMca does, probably they could use my very seem building mechanism.
>>
>> I am even considering to embed some of its capabilities into PyMca or
>> (may be even simpler), to see if they provide any plugin system that
>> could be used to embed PyMca functionality into ViTables. From the
>> screenshots supplied in their web page, they seem to be able to make
>> more complex queries on the HDF5 files.
>
> Vicent Mas (the main author of ViTables) has just implemented a
> plug-in system
> for ViTables. You will need the trunk version so as to use it, but you might
> want to have it a try.
>

Ok, I'll take a look.

Best regards,

Armando

Francesc Alted

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Jan 23, 2010, 12:11:06 PM1/23/10
to ma...@googlegroups.com
A Saturday 23 January 2010 17:12:10 Vicente Sole escrigué:

> Quoting Francesc Alted <fal...@pytables.org>:
> > A Saturday 23 January 2010 15:27:07 Vicente Sole escrigué:
> >> To me it looks as the (improved) python equivalent of HDF5viewer. A
> >> pity they do not seem to supply stand-alone executables for testing or
> >> to offer a real alternative to HDF5Viewer.
> >
> > You mean something for Windows? There is a Windows installer for
> > ViTables in:
> >
> > http://developer.berlios.de/project/showfiles.php?group_id=10366
>
> That's not a stand-alone program. It requires an end user installation
> with Python25, PyQt, PyTables, etc. in order to get the program running.

I see. Well, ViTables used to have a stand-alone installer (based on NSIS)
with everything inside except for Python itself. I'm not sure why Vicent is
not delivering it anymore (lack of time, probably...).

--
Francesc Alted

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