Groups keyboard shortcuts have been updated
Dismiss
See shortcuts

Parallel Computing on Cluster

30 views
Skip to first unread message

Teddy Gonzales

unread,
Dec 9, 2024, 11:38:24 PM12/9/24
to Macaulay2
Hello, 

I have been having problem using m2 on a cluster. I am running it through apptainer and it seems like I cannot get maxAllowableThreads to be greater than 17 even though I have allocated many more cpus than this. Any tips? 

Thank you

Mahrud Sayrafi

unread,
Dec 15, 2024, 11:04:19 PM12/15/24
to maca...@googlegroups.com
Hi Teddy,

The maximum number of threads is capped artificially here. Parallelization has improved recently, so it may be time to remove that cap in the next release.

To lift this you would have to change that line and compile M2 from source. I'm not sure what apptainer is, but if you run into trouble building M2 from source feel free to open an issue on GitHub.

Best,
Mahrud

--
You received this message because you are subscribed to the Google Groups "Macaulay2" group.
To unsubscribe from this group and stop receiving emails from it, send an email to macaulay2+...@googlegroups.com.
To view this discussion visit https://groups.google.com/d/msgid/macaulay2/dc74cc3f-90eb-4fbe-9a4e-f99c6a21614an%40googlegroups.com.
Reply all
Reply to author
Forward
0 new messages