Hey all,
I am running the demo for MaAslin2 on R. However, I keep getting the following error after running the following code:
fit_data <- Maaslin2(input_data, input_metadata, 'demo_output', transform = "AST", fixed_effects = c('diagnosis','dysbiosisnonIBD','dysbiosisUC','dysbiosisCD','antibiotics','age'), random_effects = c('site','subject'), standardize = FALSE)
ERROR that shows up on the console:
Error in data.table::fread(input_data, header = TRUE, sep = "\t") :
Input is empty or only contains BOM or terminal control characters
Does anyone come across the same error when trying the demo?
Any suggestions or comments are appreciated.
Carmen