temporary files removed

23 views
Skip to first unread message

linda....@gmail.com

unread,
Jan 4, 2019, 10:07:54 AM1/4/19
to LotuS rRNA pipeline
Good morning, 
A small thing I just observed just now. The option for keeping the temporary file (-t and -keepTmpFiles 1, and which should be on by default) seems to have an issue. Even when specifying to keep the temp dir, it will be removed after Lotus finished the run. The only way to obtain the temp dir would be to abort the run before the last step. 
Kind regards,
Linda

Falk Hildebrand

unread,
Nov 13, 2019, 3:20:12 AM11/13/19
to LotuS rRNA pipeline
Hey Linda,
sorry for the late reply. The temp files are only for debugging purposes from my perspective, hence the default. I'll look into it why they are being removed even if you have the option on, didn't use it for a long time (as I usually abort the lotus run if I need temp files ;) ). 
Please be aware that we're planning some major LotuS updates in the coming months, so might be awhile till I patch non-critical bugs.
best,
Falk
Reply all
Reply to author
Forward
0 new messages