Segmentation fault for lobSTR allelotype in train mode

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Nevena Ilic Raicevic

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Dec 30, 2019, 11:54:11 AM12/30/19
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Hi, 

I am running a lobSTR allelotype in a train mode on number of input BAM files processed in a same way, file sizes are from 1 to 5GB. 
I am getting an error: Segmentation fault for input BAM files greater of ~ 5GB. 
Is there something I could set to overcome this issue?

Melissa Gymrek

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Jan 5, 2020, 6:13:34 PM1/5/20
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Dear Nevena,
Please try using HipSTR instead: https://github.com/tfwillems/HipSTR
lobSTR is no longer being maintained.
Best,
~Melissa

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