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Flavio Gontijo

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May 9, 2019, 2:13:36 PM5/9/19
to Linkage Mapper
Hy!

I´ve been trying to run LM on ARCMap 10.6 but I´m getting this error message. Do you know how can I solve it? The complete log is attached in txt.

***Problem encountered executing statement:
"conRaster = Con(Raster(cfg.CORERAS) == int(sourceCore), 1);conRaster.save(SRCRASTER)"
The following error is being reported at line 553 of "D:\OneDrive\Programas\Linkage_Mapper_2_0_0\toolbox\scripts\s3_calcCwds.py":
RuntimeError: ERROR 999998: Unexpected Error.


Thank you all,

Flávio







**********************************************************************
Linkage Mapper log file: Linkage Mapper

Start time:    Thu May 09 08:44:33 2019
Parameters:    ['D:\\OneDrive\\Programas\\Linkage_Mapper_2_0_0\\toolbox\\scripts\\lm_master.py', 'E:\\ES_MAPEAMENTO\\LinkageMapper', 'core_area_V01', 'Orig_ID', 'resist_30', 'true', 'true', 'Connect ALL core area pairs within maximum distance cutoffs (slow if there are many core areas)', 'E:\\ES_MAPEAMENTO\\Conefor\\distances_MN_FSI.txt', 'true', 'true', 'false', '4', 'Cost-Weighted', 'true', 'true', 'true', '200000', '#', '#', '#', '#', '#']

Linkage Mapper (LM) settings from lm_settings.py:
CALCNONNORMLCCS: False
MINCOSTDIST: None
MINEUCDIST: None
SAVENORMLCCS: True
SIMPLIFY_CORES: True

********************************************************
NOTE: ArcGIS errors are more likely when writing to remote drives or deep file structures. We recommend shallow project directories on local drives, like C:\puma. Errors may also result from conflicts with anti-virus software (known problems with AVG). We have also seen conflicts when writing to synchronized folders like DROPBOX.

Note also that Linkage Mapper tools often work best when run from ArcCatalog instead of ArcMap.
 

Linkage Mapper Version 2.0.0
on ArcGIS Desktop 10.6 Service Pack N/A
Setting data frame spatial reference to that of core area feature class.
 
---------------------------------
Starting at step 1.

Making temporary copy of resistance raster for this run.

Making temporary raster of core file for this run.
 
---------------------------------
Running script s1_getAdjacencies.py
 
---------------------------------
Running script s2_buildNetwork.py
Core area distance list loaded.
number of pairwise distances = 98790
 
---------------------------------
Removed 0 duplicate core pairs in Euclidean distance table.

After removing duplicates and distances that exceed maximum,
there are 98790 pairwise distances.  Max core ID number is 445.
Creating link table

Ignoring adjacency and keeping all links


Checking for corridors that are too long to map.
Writing E:\ES_MAPEAMENTO\LinkageMapper\datapass\linkTable_s2.csv
There are 98790 links in the table.
This includes 98790 potential corridor links.
Creating shapefiles with linework for links.

Linework shapefiles written.
 
---------------------------------
Running script s3_calcCwds.py
---------------------------------
NOT using bounding circles in cost distance calculations.

Looking for E:\ES_MAPEAMENTO\LinkageMapper\datapass\linkTable_s2.csv
There are 98790 links in the table.
This includes 98790 potential corridor links.

Number of core areas to connect: 445

Creating cost-weighted distance output folders
...cw
...cw1
...etc.

Checking for corridors that are too long to map.
Creating core area raster.

Starting cost distance calculations.

---------------------------------
Target core areas for core area #1 = [  2   3   4   5   6   7   8   9  10  11  12  13  14  15  16  17  18  19
  20  21  22  23  24  25  26  27  28  29  30  31  32  33  34  35  36  37
  38  39  40  41  42  43  44  45  46  47  48  49  50  51  52  53  54  55
  56  57  58  59  60  61  62  63  64  65  66  67  68  69  70  71  72  73
  74  75  76  77  78  79  80  81  82  83  84  85  86  87  88  89  90  91
  92  93  94  95  96  97  98  99 100 101 102 103 104 105 106 107 108 109
 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127
 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145
 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163
 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 179 180 181
 182 183 184 185 186 187 188 189 190 191 192 193 194 195 196 197 198 199
 200 201 202 203 204 205 206 207 208 209 210 211 212 213 214 215 216 217
 218 219 220 221 222 223 224 225 226 227 228 229 230 231 232 233 234 235
 236 237 238 239 240 241 242 243 244 245 246 247 248 249 250 251 252 253
 254 255 256 257 258 259 260 261 262 263 264 265 266 267 268 269 270 271
 272 273 274 275 276 277 278 279 280 281 282 283 284 285 286 287 288 289
 290 291 292 293 294 295 296 297 298 299 300 301 302 303 304 305 306 307
 308 309 310 311 312 313 314 315 316 317 318 319 320 321 322 323 324 325
 326 327 328 329 330 331 332 333 334 335 336 337 338 339 340 341 342 343
 344 345 346 347 348 349 350 351 352 353 354 355 356 357 358 359 360 361
 362 363 364 365 366 367 368 369 370 371 372 373 374 375 376 377 378 379
 380 381 382 383 384 385 386 387 388 389 390 391 392 393 394 395 396 397
 398 399 400 401 402 403 404 405 406 407 408 409 410 411 412 413 414 415
 416 417 418 419 420 421 422 423 424 425 426 427 428 429 430 431 432 433
 434 435 436 437 438 439 440 441 442 443 444 445]
Done with all calculations for core ID #1. 1 of 445 cores have been processed.
That took 2 minutes and 11 seconds.

---------------------------------
Target core areas for core area #2 = [  1   3   4   5   6   7   8   9  10  11  12  13  14  15  16  17  18  19
  20  21  22  23  24  25  26  27  28  29  30  31  32  33  34  35  36  37
  38  39  40  41  42  43  44  45  46  47  48  49  50  51  52  53  54  55
  56  57  58  59  60  61  62  63  64  65  66  67  68  69  70  71  72  73
  74  75  76  77  78  79  80  81  82  83  84  85  86  87  88  89  90  91
  92  93  94  95  96  97  98  99 100 101 102 103 104 105 106 107 108 109
 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127
 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145
 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163
 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 179 180 181
 182 183 184 185 186 187 188 189 190 191 192 193 194 195 196 197 198 199
 200 201 202 203 204 205 206 207 208 209 210 211 212 213 214 215 216 217
 218 219 220 221 222 223 224 225 226 227 228 229 230 231 232 233 234 235
 236 237 238 239 240 241 242 243 244 245 246 247 248 249 250 251 252 253
 254 255 256 257 258 259 260 261 262 263 264 265 266 267 268 269 270 271
 272 273 274 275 276 277 278 279 280 281 282 283 284 285 286 287 288 289
 290 291 292 293 294 295 296 297 298 299 300 301 302 303 304 305 306 307
 308 309 310 311 312 313 314 315 316 317 318 319 320 321 322 323 324 325
 326 327 328 329 330 331 332 333 334 335 336 337 338 339 340 341 342 343
 344 345 346 347 348 349 350 351 352 353 354 355 356 357 358 359 360 361
 362 363 364 365 366 367 368 369 370 371 372 373 374 375 376 377 378 379
 380 381 382 383 384 385 386 387 388 389 390 391 392 393 394 395 396 397
 398 399 400 401 402 403 404 405 406 407 408 409 410 411 412 413 414 415
 416 417 418 419 420 421 422 423 424 425 426 427 428 429 430 431 432 433
 434 435 436 437 438 439 440 441 442 443 444 445]
Found an intermediate core in the least-cost path between cores 2 and 101.  The corridor will be removed.
Found an intermediate core in the least-cost path between cores 2 and 115.  The corridor will be removed.
Found an intermediate core in the least-cost path between cores 2 and 180.  The corridor will be removed.
Found an intermediate core in the least-cost path between cores 2 and 242.  The corridor will be removed.
Found an intermediate core in the least-cost path between cores 2 and 300.  The corridor will be removed.
Found an intermediate core in the least-cost path between cores 2 and 348.  The corridor will be removed.
Found an intermediate core in the least-cost path between cores 2 and 442.  The corridor will be removed.
Done with all calculations for core ID #2. 2 of 445 cores have been processed.
That took 27 minutes and 38 seconds.

---------------------------------
Target core areas for core area #3 = [  1   2   4   5   6   7   8   9  10  11  12  13  14  15  16  17  18  19
  20  21  22  23  24  25  26  27  28  29  30  31  32  33  34  35  36  37
  38  39  40  41  42  43  44  45  46  47  48  49  50  51  52  53  54  55
  56  57  58  59  60  61  62  63  64  65  66  67  68  69  70  71  72  73
  74  75  76  77  78  79  80  81  82  83  84  85  86  87  88  89  90  91
  92  93  94  95  96  97  98  99 100 101 102 103 104 105 106 107 108 109
 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127
 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145
 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163
 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 179 180 181
 182 183 184 185 186 187 188 189 190 191 192 193 194 195 196 197 198 199
 200 201 202 203 204 205 206 207 208 209 210 211 212 213 214 215 216 217
 218 219 220 221 222 223 224 225 226 227 228 229 230 231 232 233 234 235
 236 237 238 239 240 241 242 243 244 245 246 247 248 249 250 251 252 253
 254 255 256 257 258 259 260 261 262 263 264 265 266 267 268 269 270 271
 272 273 274 275 276 277 278 279 280 281 282 283 284 285 286 287 288 289
 290 291 292 293 294 295 296 297 298 299 300 301 302 303 304 305 306 307
 308 309 310 311 312 313 314 315 316 317 318 319 320 321 322 323 324 325
 326 327 328 329 330 331 332 333 334 335 336 337 338 339 340 341 342 343
 344 345 346 347 348 349 350 351 352 353 354 355 356 357 358 359 360 361
 362 363 364 365 366 367 368 369 370 371 372 373 374 375 376 377 378 379
 380 381 382 383 384 385 386 387 388 389 390 391 392 393 394 395 396 397
 398 399 400 401 402 403 404 405 406 407 408 409 410 411 412 413 414 415
 416 417 418 419 420 421 422 423 424 425 426 427 428 429 430 431 432 433
 434 435 436 437 438 439 440 441 442 443 444 445]
Done with all calculations for core ID #3. 3 of 445 cores have been processed.
That took 1 minutes and 49 seconds.

---------------------------------
Target core areas for core area #4 = [  1   2   3   5   6   7   8   9  10  11  12  13  14  15  16  17  18  19
  20  21  22  23  24  25  26  27  28  29  30  31  32  33  34  35  36  37
  38  39  40  41  42  43  44  45  46  47  48  49  50  51  52  53  54  55
  56  57  58  59  60  61  62  63  64  65  66  67  68  69  70  71  72  73
  74  75  76  77  78  79  80  81  82  83  84  85  86  87  88  89  90  91
  92  93  94  95  96  97  98  99 100 101 102 103 104 105 106 107 108 109
 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127
 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145
 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163
 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 179 180 181
 182 183 184 185 186 187 188 189 190 191 192 193 194 195 196 197 198 199
 200 201 202 203 204 205 206 207 208 209 210 211 212 213 214 215 216 217
 218 219 220 221 222 223 224 225 226 227 228 229 230 231 232 233 234 235
 236 237 238 239 240 241 242 243 244 245 246 247 248 249 250 251 252 253
 254 255 256 257 258 259 260 261 262 263 264 265 266 267 268 269 270 271
 272 273 274 275 276 277 278 279 280 281 282 283 284 285 286 287 288 289
 290 291 292 293 294 295 296 297 298 299 300 301 302 303 304 305 306 307
 308 309 310 311 312 313 314 315 316 317 318 319 320 321 322 323 324 325
 326 327 328 329 330 331 332 333 334 335 336 337 338 339 340 341 342 343
 344 345 346 347 348 349 350 351 352 353 354 355 356 357 358 359 360 361
 362 363 364 365 366 367 368 369 370 371 372 373 374 375 376 377 378 379
 380 381 382 383 384 385 386 387 388 389 390 391 392 393 394 395 396 397
 398 399 400 401 402 403 404 405 406 407 408 409 410 411 412 413 414 415
 416 417 418 419 420 421 422 423 424 425 426 427 428 429 430 431 432 433
 434 435 436 437 438 439 440 441 442 443 444 445]
Found an intermediate core in the least-cost path between cores 4 and 115.  The corridor will be removed.
Found an intermediate core in the least-cost path between cores 4 and 122.  The corridor will be removed.
Found an intermediate core in the least-cost path between cores 4 and 242.  The corridor will be removed.
Found an intermediate core in the least-cost path between cores 4 and 300.  The corridor will be removed.
Done with all calculations for core ID #4. 4 of 445 cores have been processed.
That took 27 minutes and 10 seconds.

---------------------------------
Target core areas for core area #5 = [  1   2   3   4   6   7   8   9  10  11  12  13  14  15  16  17  18  19
  20  21  22  23  24  25  26  27  28  29  30  31  32  33  34  35  36  37
  38  39  40  41  42  43  44  45  46  47  48  49  50  51  52  53  54  55
  56  57  58  59  60  61  62  63  64  65  66  67  68  69  70  71  72  73
  74  75  76  77  78  79  80  81  82  83  84  85  86  87  88  89  90  91
  92  93  94  95  96  97  98  99 100 101 102 103 104 105 106 107 108 109
 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127
 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145
 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163
 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 179 180 181
 182 183 184 185 186 187 188 189 190 191 192 193 194 195 196 197 198 199
 200 201 202 203 204 205 206 207 208 209 210 211 212 213 214 215 216 217
 218 219 220 221 222 223 224 225 226 227 228 229 230 231 232 233 234 235
 236 237 238 239 240 241 242 243 244 245 246 247 248 249 250 251 252 253
 254 255 256 257 258 259 260 261 262 263 264 265 266 267 268 269 270 271
 272 273 274 275 276 277 278 279 280 281 282 283 284 285 286 287 288 289
 290 291 292 293 294 295 296 297 298 299 300 301 302 303 304 305 306 307
 308 309 310 311 312 313 314 315 316 317 318 319 320 321 322 323 324 325
 326 327 328 329 330 331 332 333 334 335 336 337 338 339 340 341 342 343
 344 345 346 347 348 349 350 351 352 353 354 355 356 357 358 359 360 361
 362 363 364 365 366 367 368 369 370 371 372 373 374 375 376 377 378 379
 380 381 382 383 384 385 386 387 388 389 390 391 392 393 394 395 396 397
 398 399 400 401 402 403 404 405 406 407 408 409 410 411 412 413 414 415
 416 417 418 419 420 421 422 423 424 425 426 427 428 429 430 431 432 433
 434 435 436 437 438 439 440 441 442 443 444 445]
Found an intermediate core in the least-cost path between cores 5 and 41.  The corridor will be removed.
Found an intermediate core in the least-cost path between cores 5 and 114.  The corridor will be removed.
Found an intermediate core in the least-cost path between cores 5 and 192.  The corridor will be removed.
Found an intermediate core in the least-cost path between cores 5 and 193.  The corridor will be removed.
Found an intermediate core in the least-cost path between cores 5 and 209.  The corridor will be removed.
Found an intermediate core in the least-cost path between cores 5 and 215.  The corridor will be removed.
Found an intermediate core in the least-cost path between cores 5 and 218.  The corridor will be removed.
Found an intermediate core in the least-cost path between cores 5 and 225.  The corridor will be removed.
Found an intermediate core in the least-cost path between cores 5 and 242.  The corridor will be removed.
Found an intermediate core in the least-cost path between cores 5 and 251.  The corridor will be removed.
Found an intermediate core in the least-cost path between cores 5 and 258.  The corridor will be removed.
Found an intermediate core in the least-cost path between cores 5 and 264.  The corridor will be removed.
Found an intermediate core in the least-cost path between cores 5 and 324.  The corridor will be removed.
Found an intermediate core in the least-cost path between cores 5 and 360.  The corridor will be removed.
Found an intermediate core in the least-cost path between cores 5 and 414.  The corridor will be removed.
Done with all calculations for core ID #5. 5 of 445 cores have been processed.
That took 27 minutes and 52 seconds.

---------------------------------
Target core areas for core area #6 = [  1   2   3   4   5   7   8   9  10  11  12  13  14  15  16  17  18  19
  20  21  22  23  24  25  26  27  28  29  30  31  32  33  34  35  36  37
  38  39  40  41  42  43  44  45  46  47  48  49  50  51  52  53  54  55
  56  57  58  59  60  61  62  63  64  65  66  67  68  69  70  71  72  73
  74  75  76  77  78  79  80  81  82  83  84  85  86  87  88  89  90  91
  92  93  94  95  96  97  98  99 100 101 102 103 104 105 106 107 108 109
 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127
 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145
 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163
 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 179 180 181
 182 183 184 185 186 187 188 189 190 191 192 193 194 195 196 197 198 199
 200 201 202 203 204 205 206 207 208 209 210 211 212 213 214 215 216 217
 218 219 220 221 222 223 224 225 226 227 228 229 230 231 232 233 234 235
 236 237 238 239 240 241 242 243 244 245 246 247 248 249 250 251 252 253
 254 255 256 257 258 259 260 261 262 263 264 265 266 267 268 269 270 271
 272 273 274 275 276 277 278 279 280 281 282 283 284 285 286 287 288 289
 290 291 292 293 294 295 296 297 298 299 300 301 302 303 304 305 306 307
 308 309 310 311 312 313 314 315 316 317 318 319 320 321 322 323 324 325
 326 327 328 329 330 331 332 333 334 335 336 337 338 339 340 341 342 343
 344 345 346 347 348 349 350 351 352 353 354 355 356 357 358 359 360 361
 362 363 364 365 366 367 368 369 370 371 372 373 374 375 376 377 378 379
 380 381 382 383 384 385 386 387 388 389 390 391 392 393 394 395 396 397
 398 399 400 401 402 403 404 405 406 407 408 409 410 411 412 413 414 415
 416 417 418 419 420 421 422 423 424 425 426 427 428 429 430 431 432 433
 434 435 436 437 438 439 440 441 442 443 444 445]
Done with all calculations for core ID #6. 6 of 445 cores have been processed.
That took 1 minutes and 56 seconds.

---------------------------------
Target core areas for core area #7 = [  1   2   3   4   5   6   8   9  10  11  12  13  14  15  16  17  18  19
  20  21  22  23  24  25  26  27  28  29  30  31  32  33  34  35  36  37
  38  39  40  41  42  43  44  45  46  47  48  49  50  51  52  53  54  55
  56  57  58  59  60  61  62  63  64  65  66  67  68  69  70  71  72  73
  74  75  76  77  78  79  80  81  82  83  84  85  86  87  88  89  90  91
  92  93  94  95  96  97  98  99 100 101 102 103 104 105 106 107 108 109
 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127
 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145
 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163
 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 179 180 181
 182 183 184 185 186 187 188 189 190 191 192 193 194 195 196 197 198 199
 200 201 202 203 204 205 206 207 208 209 210 211 212 213 214 215 216 217
 218 219 220 221 222 223 224 225 226 227 228 229 230 231 232 233 234 235
 236 237 238 239 240 241 242 243 244 245 246 247 248 249 250 251 252 253
 254 255 256 257 258 259 260 261 262 263 264 265 266 267 268 269 270 271
 272 273 274 275 276 277 278 279 280 281 282 283 284 285 286 287 288 289
 290 291 292 293 294 295 296 297 298 299 300 301 302 303 304 305 306 307
 308 309 310 311 312 313 314 315 316 317 318 319 320 321 322 323 324 325
 326 327 328 329 330 331 332 333 334 335 336 337 338 339 340 341 342 343
 344 345 346 347 348 349 350 351 352 353 354 355 356 357 358 359 360 361
 362 363 364 365 366 367 368 369 370 371 372 373 374 375 376 377 378 379
 380 381 382 383 384 385 386 387 388 389 390 391 392 393 394 395 396 397
 398 399 400 401 402 403 404 405 406 407 408 409 410 411 412 413 414 415
 416 417 418 419 420 421 422 423 424 425 426 427 428 429 430 431 432 433
 434 435 436 437 438 439 440 441 442 443 444 445]
Done with all calculations for core ID #7. 7 of 445 cores have been processed.
That took 1 minutes and 52 seconds.

---------------------------------
Target core areas for core area #8 = [  1   2   3   4   5   6   7   9  10  11  12  13  14  15  16  17  18  19
  20  21  22  23  24  25  26  27  28  29  30  31  32  33  34  35  36  37
  38  39  40  41  42  43  44  45  46  47  48  49  50  51  52  53  54  55
  56  57  58  59  60  61  62  63  64  65  66  67  68  69  70  71  72  73
  74  75  76  77  78  79  80  81  82  83  84  85  86  87  88  89  90  91
  92  93  94  95  96  97  98  99 100 101 102 103 104 105 106 107 108 109
 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127
 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145
 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163
 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 179 180 181
 182 183 184 185 186 187 188 189 190 191 192 193 194 195 196 197 198 199
 200 201 202 203 204 205 206 207 208 209 210 211 212 213 214 215 216 217
 218 219 220 221 222 223 224 225 226 227 228 229 230 231 232 233 234 235
 236 237 238 239 240 241 242 243 244 245 246 247 248 249 250 251 252 253
 254 255 256 257 258 259 260 261 262 263 264 265 266 267 268 269 270 271
 272 273 274 275 276 277 278 279 280 281 282 283 284 285 286 287 288 289
 290 291 292 293 294 295 296 297 298 299 300 301 302 303 304 305 306 307
 308 309 310 311 312 313 314 315 316 317 318 319 320 321 322 323 324 325
 326 327 328 329 330 331 332 333 334 335 336 337 338 339 340 341 342 343
 344 345 346 347 348 349 350 351 352 353 354 355 356 357 358 359 360 361
 362 363 364 365 366 367 368 369 370 371 372 373 374 375 376 377 378 379
 380 381 382 383 384 385 386 387 388 389 390 391 392 393 394 395 396 397
 398 399 400 401 402 403 404 405 406 407 408 409 410 411 412 413 414 415
 416 417 418 419 420 421 422 423 424 425 426 427 428 429 430 431 432 433
 434 435 436 437 438 439 440 441 442 443 444 445]
Found an intermediate core in the least-cost path between cores 8 and 41.  The corridor will be removed.
Found an intermediate core in the least-cost path between cores 8 and 56.  The corridor will be removed.
Found an intermediate core in the least-cost path between cores 8 and 102.  The corridor will be removed.
Found an intermediate core in the least-cost path between cores 8 and 114.  The corridor will be removed.
Found an intermediate core in the least-cost path between cores 8 and 136.  The corridor will be removed.
Found an intermediate core in the least-cost path between cores 8 and 139.  The corridor will be removed.
Found an intermediate core in the least-cost path between cores 8 and 140.  The corridor will be removed.
Found an intermediate core in the least-cost path between cores 8 and 192.  The corridor will be removed.
Found an intermediate core in the least-cost path between cores 8 and 209.  The corridor will be removed.
Found an intermediate core in the least-cost path between cores 8 and 215.  The corridor will be removed.
Found an intermediate core in the least-cost path between cores 8 and 218.  The corridor will be removed.
Found an intermediate core in the least-cost path between cores 8 and 225.  The corridor will be removed.
Found an intermediate core in the least-cost path between cores 8 and 242.  The corridor will be removed.
Found an intermediate core in the least-cost path between cores 8 and 251.  The corridor will be removed.
Found an intermediate core in the least-cost path between cores 8 and 258.  The corridor will be removed.
Found an intermediate core in the least-cost path between cores 8 and 360.  The corridor will be removed.
Done with all calculations for core ID #8. 8 of 445 cores have been processed.
That took 26 minutes and 32 seconds.

---------------------------------
Target core areas for core area #9 = [  1   2   3   4   5   6   7   8  10  11  12  13  14  15  16  17  18  19
  20  21  22  23  24  25  26  27  28  29  30  31  32  33  34  35  36  37
  38  39  40  41  42  43  44  45  46  47  48  49  50  51  52  53  54  55
  56  57  58  59  60  61  62  63  64  65  66  67  68  69  70  71  72  73
  74  75  76  77  78  79  80  81  82  83  84  85  86  87  88  89  90  91
  92  93  94  95  96  97  98  99 100 101 102 103 104 105 106 107 108 109
 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127
 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145
 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163
 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 179 180 181
 182 183 184 185 186 187 188 189 190 191 192 193 194 195 196 197 198 199
 200 201 202 203 204 205 206 207 208 209 210 211 212 213 214 215 216 217
 218 219 220 221 222 223 224 225 226 227 228 229 230 231 232 233 234 235
 236 237 238 239 240 241 242 243 244 245 246 247 248 249 250 251 252 253
 254 255 256 257 258 259 260 261 262 263 264 265 266 267 268 269 270 271
 272 273 274 275 276 277 278 279 280 281 282 283 284 285 286 287 288 289
 290 291 292 293 294 295 296 297 298 299 300 301 302 303 304 305 306 307
 308 309 310 311 312 313 314 315 316 317 318 319 320 321 322 323 324 325
 326 327 328 329 330 331 332 333 334 335 336 337 338 339 340 341 342 343
 344 345 346 347 348 349 350 351 352 353 354 355 356 357 358 359 360 361
 362 363 364 365 366 367 368 369 370 371 372 373 374 375 376 377 378 379
 380 381 382 383 384 385 386 387 388 389 390 391 392 393 394 395 396 397
 398 399 400 401 402 403 404 405 406 407 408 409 410 411 412 413 414 415
 416 417 418 419 420 421 422 423 424 425 426 427 428 429 430 431 432 433
 434 435 436 437 438 439 440 441 442 443 444 445]
 
---------------------------------
***Problem encountered executing statement:
"outCostDist = CostDistance(SRCRASTER, bResistance, cfg.TMAXCWDIST, back_rast);outCostDist.save(outDistanceRaster)"
The following ArcGIS error is being reported on line line 577 of "D:\OneDrive\Programas\Linkage_Mapper_2_0_0\toolbox\scripts\s3_calcCwds.py":
ERROR 999999: Error executing function.
Failed to write a pixel block. [Possibly out of disk space]
Failed to execute (CostDistance).


********************************************************
NOTE: ArcGIS errors are more likely when writing to remote drives or deep file structures. We recommend shallow project directories on local drives, like C:\puma. Errors may also result from conflicts with anti-virus software (known problems with AVG). We have also seen conflicts when writing to synchronized folders like DROPBOX.

Note also that Linkage Mapper tools often work best when run from ArcCatalog instead of ArcMap.
 
That was try #1 of 20 for this core area.
Restarting iteration in 10 seconds.
---------------------------------
 
---------------------------------
Target core areas for core area #9 = [  1   2   3   4   5   6   7   8  10  11  12  13  14  15  16  17  18  19
  20  21  22  23  24  25  26  27  28  29  30  31  32  33  34  35  36  37
  38  39  40  41  42  43  44  45  46  47  48  49  50  51  52  53  54  55
  56  57  58  59  60  61  62  63  64  65  66  67  68  69  70  71  72  73
  74  75  76  77  78  79  80  81  82  83  84  85  86  87  88  89  90  91
  92  93  94  95  96  97  98  99 100 101 102 103 104 105 106 107 108 109
 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127
 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145
 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163
 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 179 180 181
 182 183 184 185 186 187 188 189 190 191 192 193 194 195 196 197 198 199
 200 201 202 203 204 205 206 207 208 209 210 211 212 213 214 215 216 217
 218 219 220 221 222 223 224 225 226 227 228 229 230 231 232 233 234 235
 236 237 238 239 240 241 242 243 244 245 246 247 248 249 250 251 252 253
 254 255 256 257 258 259 260 261 262 263 264 265 266 267 268 269 270 271
 272 273 274 275 276 277 278 279 280 281 282 283 284 285 286 287 288 289
 290 291 292 293 294 295 296 297 298 299 300 301 302 303 304 305 306 307
 308 309 310 311 312 313 314 315 316 317 318 319 320 321 322 323 324 325
 326 327 328 329 330 331 332 333 334 335 336 337 338 339 340 341 342 343
 344 345 346 347 348 349 350 351 352 353 354 355 356 357 358 359 360 361
 362 363 364 365 366 367 368 369 370 371 372 373 374 375 376 377 378 379
 380 381 382 383 384 385 386 387 388 389 390 391 392 393 394 395 396 397
 398 399 400 401 402 403 404 405 406 407 408 409 410 411 412 413 414 415
 416 417 418 419 420 421 422 423 424 425 426 427 428 429 430 431 432 433
 434 435 436 437 438 439 440 441 442 443 444 445]
 
---------------------------------
***Problem encountered executing statement:
"conRaster = Con(Raster(cfg.CORERAS) == int(sourceCore), 1);conRaster.save(SRCRASTER)"
The following error is being reported at line 553 of "D:\OneDrive\Programas\Linkage_Mapper_2_0_0\toolbox\scripts\s3_calcCwds.py":
RuntimeError: ERROR 999998: Unexpected Error.
That was try #2 of 20 for this core area.
Restarting iteration in 20 seconds.
---------------------------------
 
---------------------------------
Target core areas for core area #9 = [  1   2   3   4   5   6   7   8  10  11  12  13  14  15  16  17  18  19
  20  21  22  23  24  25  26  27  28  29  30  31  32  33  34  35  36  37
  38  39  40  41  42  43  44  45  46  47  48  49  50  51  52  53  54  55
  56  57  58  59  60  61  62  63  64  65  66  67  68  69  70  71  72  73
  74  75  76  77  78  79  80  81  82  83  84  85  86  87  88  89  90  91
  92  93  94  95  96  97  98  99 100 101 102 103 104 105 106 107 108 109
 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127
 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145
 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163
 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 179 180 181
 182 183 184 185 186 187 188 189 190 191 192 193 194 195 196 197 198 199
 200 201 202 203 204 205 206 207 208 209 210 211 212 213 214 215 216 217
 218 219 220 221 222 223 224 225 226 227 228 229 230 231 232 233 234 235
 236 237 238 239 240 241 242 243 244 245 246 247 248 249 250 251 252 253
 254 255 256 257 258 259 260 261 262 263 264 265 266 267 268 269 270 271
 272 273 274 275 276 277 278 279 280 281 282 283 284 285 286 287 288 289
 290 291 292 293 294 295 296 297 298 299 300 301 302 303 304 305 306 307
 308 309 310 311 312 313 314 315 316 317 318 319 320 321 322 323 324 325
 326 327 328 329 330 331 332 333 334 335 336 337 338 339 340 341 342 343
 344 345 346 347 348 349 350 351 352 353 354 355 356 357 358 359 360 361
 362 363 364 365 366 367 368 369 370 371 372 373 374 375 376 377 378 379
 380 381 382 383 384 385 386 387 388 389 390 391 392 393 394 395 396 397
 398 399 400 401 402 403 404 405 406 407 408 409 410 411 412 413 414 415
 416 417 418 419 420 421 422 423 424 425 426 427 428 429 430 431 432 433
 434 435 436 437 438 439 440 441 442 443 444 445]
 
---------------------------------
***Problem encountered executing statement:
"conRaster = Con(Raster(cfg.CORERAS) == int(sourceCore), 1);conRaster.save(SRCRASTER)"
The following error is being reported at line 553 of "D:\OneDrive\Programas\Linkage_Mapper_2_0_0\toolbox\scripts\s3_calcCwds.py":
RuntimeError: ERROR 999998: Unexpected Error.
That was try #3 of 20 for this core area.
Restarting iteration in 30 seconds.
---------------------------------
 
---------------------------------
Target core areas for core area #9 = [  1   2   3   4   5   6   7   8  10  11  12  13  14  15  16  17  18  19
  20  21  22  23  24  25  26  27  28  29  30  31  32  33  34  35  36  37
  38  39  40  41  42  43  44  45  46  47  48  49  50  51  52  53  54  55
  56  57  58  59  60  61  62  63  64  65  66  67  68  69  70  71  72  73
  74  75  76  77  78  79  80  81  82  83  84  85  86  87  88  89  90  91
  92  93  94  95  96  97  98  99 100 101 102 103 104 105 106 107 108 109
 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127
 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145
 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163
 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 179 180 181
 182 183 184 185 186 187 188 189 190 191 192 193 194 195 196 197 198 199
 200 201 202 203 204 205 206 207 208 209 210 211 212 213 214 215 216 217
 218 219 220 221 222 223 224 225 226 227 228 229 230 231 232 233 234 235
 236 237 238 239 240 241 242 243 244 245 246 247 248 249 250 251 252 253
 254 255 256 257 258 259 260 261 262 263 264 265 266 267 268 269 270 271
 272 273 274 275 276 277 278 279 280 281 282 283 284 285 286 287 288 289
 290 291 292 293 294 295 296 297 298 299 300 301 302 303 304 305 306 307
 308 309 310 311 312 313 314 315 316 317 318 319 320 321 322 323 324 325
 326 327 328 329 330 331 332 333 334 335 336 337 338 339 340 341 342 343
 344 345 346 347 348 349 350 351 352 353 354 355 356 357 358 359 360 361
 362 363 364 365 366 367 368 369 370 371 372 373 374 375 376 377 378 379
 380 381 382 383 384 385 386 387 388 389 390 391 392 393 394 395 396 397
 398 399 400 401 402 403 404 405 406 407 408 409 410 411 412 413 414 415
 416 417 418 419 420 421 422 423 424 425 426 427 428 429 430 431 432 433
 434 435 436 437 438 439 440 441 442 443 444 445]
 
---------------------------------
***Problem encountered executing statement:
"conRaster = Con(Raster(cfg.CORERAS) == int(sourceCore), 1);conRaster.save(SRCRASTER)"
The following error is being reported at line 553 of "D:\OneDrive\Programas\Linkage_Mapper_2_0_0\toolbox\scripts\s3_calcCwds.py":
RuntimeError: ERROR 999998: Unexpected Error.
That was try #4 of 20 for this core area.
Restarting iteration in 40 seconds.
---------------------------------
 
---------------------------------
Target core areas for core area #9 = [  1   2   3   4   5   6   7   8  10  11  12  13  14  15  16  17  18  19
  20  21  22  23  24  25  26  27  28  29  30  31  32  33  34  35  36  37
  38  39  40  41  42  43  44  45  46  47  48  49  50  51  52  53  54  55
  56  57  58  59  60  61  62  63  64  65  66  67  68  69  70  71  72  73
  74  75  76  77  78  79  80  81  82  83  84  85  86  87  88  89  90  91
  92  93  94  95  96  97  98  99 100 101 102 103 104 105 106 107 108 109
 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127
 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145
 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163
 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 179 180 181
 182 183 184 185 186 187 188 189 190 191 192 193 194 195 196 197 198 199
 200 201 202 203 204 205 206 207 208 209 210 211 212 213 214 215 216 217
 218 219 220 221 222 223 224 225 226 227 228 229 230 231 232 233 234 235
 236 237 238 239 240 241 242 243 244 245 246 247 248 249 250 251 252 253
 254 255 256 257 258 259 260 261 262 263 264 265 266 267 268 269 270 271
 272 273 274 275 276 277 278 279 280 281 282 283 284 285 286 287 288 289
 290 291 292 293 294 295 296 297 298 299 300 301 302 303 304 305 306 307
 308 309 310 311 312 313 314 315 316 317 318 319 320 321 322 323 324 325
 326 327 328 329 330 331 332 333 334 335 336 337 338 339 340 341 342 343
 344 345 346 347 348 349 350 351 352 353 354 355 356 357 358 359 360 361
 362 363 364 365 366 367 368 369 370 371 372 373 374 375 376 377 378 379
 380 381 382 383 384 385 386 387 388 389 390 391 392 393 394 395 396 397
 398 399 400 401 402 403 404 405 406 407 408 409 410 411 412 413 414 415
 416 417 418 419 420 421 422 423 424 425 426 427 428 429 430 431 432 433
 434 435 436 437 438 439 440 441 442 443 444 445]
 
---------------------------------
***Problem encountered executing statement:
"conRaster = Con(Raster(cfg.CORERAS) == int(sourceCore), 1);conRaster.save(SRCRASTER)"
The following error is being reported at line 553 of "D:\OneDrive\Programas\Linkage_Mapper_2_0_0\toolbox\scripts\s3_calcCwds.py":
RuntimeError: ERROR 999998: Unexpected Error.
That was try #5 of 20 for this core area.
Restarting iteration in 50 seconds.
---------------------------------
 
---------------------------------
Target core areas for core area #9 = [  1   2   3   4   5   6   7   8  10  11  12  13  14  15  16  17  18  19
  20  21  22  23  24  25  26  27  28  29  30  31  32  33  34  35  36  37
  38  39  40  41  42  43  44  45  46  47  48  49  50  51  52  53  54  55
  56  57  58  59  60  61  62  63  64  65  66  67  68  69  70  71  72  73
  74  75  76  77  78  79  80  81  82  83  84  85  86  87  88  89  90  91
  92  93  94  95  96  97  98  99 100 101 102 103 104 105 106 107 108 109
 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127
 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145
 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163
 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 179 180 181
 182 183 184 185 186 187 188 189 190 191 192 193 194 195 196 197 198 199
 200 201 202 203 204 205 206 207 208 209 210 211 212 213 214 215 216 217
 218 219 220 221 222 223 224 225 226 227 228 229 230 231 232 233 234 235
 236 237 238 239 240 241 242 243 244 245 246 247 248 249 250 251 252 253
 254 255 256 257 258 259 260 261 262 263 264 265 266 267 268 269 270 271
 272 273 274 275 276 277 278 279 280 281 282 283 284 285 286 287 288 289
 290 291 292 293 294 295 296 297 298 299 300 301 302 303 304 305 306 307
 308 309 310 311 312 313 314 315 316 317 318 319 320 321 322 323 324 325
 326 327 328 329 330 331 332 333 334 335 336 337 338 339 340 341 342 343
 344 345 346 347 348 349 350 351 352 353 354 355 356 357 358 359 360 361
 362 363 364 365 366 367 368 369 370 371 372 373 374 375 376 377 378 379
 380 381 382 383 384 385 386 387 388 389 390 391 392 393 394 395 396 397
 398 399 400 401 402 403 404 405 406 407 408 409 410 411 412 413 414 415
 416 417 418 419 420 421 422 423 424 425 426 427 428 429 430 431 432 433
 434 435 436 437 438 439 440 441 442 443 444 445]
 
---------------------------------
***Problem encountered executing statement:
"conRaster = Con(Raster(cfg.CORERAS) == int(sourceCore), 1);conRaster.save(SRCRASTER)"
The following error is being reported at line 553 of "D:\OneDrive\Programas\Linkage_Mapper_2_0_0\toolbox\scripts\s3_calcCwds.py":
RuntimeError: ERROR 999998: Unexpected Error.
That was try #6 of 20 for this core area.
Restarting iteration in 60 seconds.
---------------------------------
 
---------------------------------
Target core areas for core area #9 = [  1   2   3   4   5   6   7   8  10  11  12  13  14  15  16  17  18  19
  20  21  22  23  24  25  26  27  28  29  30  31  32  33  34  35  36  37
  38  39  40  41  42  43  44  45  46  47  48  49  50  51  52  53  54  55
  56  57  58  59  60  61  62  63  64  65  66  67  68  69  70  71  72  73
  74  75  76  77  78  79  80  81  82  83  84  85  86  87  88  89  90  91
  92  93  94  95  96  97  98  99 100 101 102 103 104 105 106 107 108 109
 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127
 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145
 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163
 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 179 180 181
 182 183 184 185 186 187 188 189 190 191 192 193 194 195 196 197 198 199
 200 201 202 203 204 205 206 207 208 209 210 211 212 213 214 215 216 217
 218 219 220 221 222 223 224 225 226 227 228 229 230 231 232 233 234 235
 236 237 238 239 240 241 242 243 244 245 246 247 248 249 250 251 252 253
 254 255 256 257 258 259 260 261 262 263 264 265 266 267 268 269 270 271
 272 273 274 275 276 277 278 279 280 281 282 283 284 285 286 287 288 289
 290 291 292 293 294 295 296 297 298 299 300 301 302 303 304 305 306 307
 308 309 310 311 312 313 314 315 316 317 318 319 320 321 322 323 324 325
 326 327 328 329 330 331 332 333 334 335 336 337 338 339 340 341 342 343
 344 345 346 347 348 349 350 351 352 353 354 355 356 357 358 359 360 361
 362 363 364 365 366 367 368 369 370 371 372 373 374 375 376 377 378 379
 380 381 382 383 384 385 386 387 388 389 390 391 392 393 394 395 396 397
 398 399 400 401 402 403 404 405 406 407 408 409 410 411 412 413 414 415
 416 417 418 419 420 421 422 423 424 425 426 427 428 429 430 431 432 433
 434 435 436 437 438 439 440 441 442 443 444 445]
 
---------------------------------
***Problem encountered executing statement:
"conRaster = Con(Raster(cfg.CORERAS) == int(sourceCore), 1);conRaster.save(SRCRASTER)"
The following error is being reported at line 553 of "D:\OneDrive\Programas\Linkage_Mapper_2_0_0\toolbox\scripts\s3_calcCwds.py":
RuntimeError: ERROR 999998: Unexpected Error.
That was try #7 of 20 for this core area.
Restarting iteration in 5 minutes.
---------------------------------
 
---------------------------------
Target core areas for core area #9 = [  1   2   3   4   5   6   7   8  10  11  12  13  14  15  16  17  18  19
  20  21  22  23  24  25  26  27  28  29  30  31  32  33  34  35  36  37
  38  39  40  41  42  43  44  45  46  47  48  49  50  51  52  53  54  55
  56  57  58  59  60  61  62  63  64  65  66  67  68  69  70  71  72  73
  74  75  76  77  78  79  80  81  82  83  84  85  86  87  88  89  90  91
  92  93  94  95  96  97  98  99 100 101 102 103 104 105 106 107 108 109
 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127
 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145
 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163
 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 179 180 181
 182 183 184 185 186 187 188 189 190 191 192 193 194 195 196 197 198 199
 200 201 202 203 204 205 206 207 208 209 210 211 212 213 214 215 216 217
 218 219 220 221 222 223 224 225 226 227 228 229 230 231 232 233 234 235
 236 237 238 239 240 241 242 243 244 245 246 247 248 249 250 251 252 253
 254 255 256 257 258 259 260 261 262 263 264 265 266 267 268 269 270 271
 272 273 274 275 276 277 278 279 280 281 282 283 284 285 286 287 288 289
 290 291 292 293 294 295 296 297 298 299 300 301 302 303 304 305 306 307
 308 309 310 311 312 313 314 315 316 317 318 319 320 321 322 323 324 325
 326 327 328 329 330 331 332 333 334 335 336 337 338 339 340 341 342 343
 344 345 346 347 348 349 350 351 352 353 354 355 356 357 358 359 360 361
 362 363 364 365 366 367 368 369 370 371 372 373 374 375 376 377 378 379
 380 381 382 383 384 385 386 387 388 389 390 391 392 393 394 395 396 397
 398 399 400 401 402 403 404 405 406 407 408 409 410 411 412 413 414 415
 416 417 418 419 420 421 422 423 424 425 426 427 428 429 430 431 432 433
 434 435 436 437 438 439 440 441 442 443 444 445]
 
---------------------------------
***Problem encountered executing statement:
"conRaster = Con(Raster(cfg.CORERAS) == int(sourceCore), 1);conRaster.save(SRCRASTER)"
The following error is being reported at line 553 of "D:\OneDrive\Programas\Linkage_Mapper_2_0_0\toolbox\scripts\s3_calcCwds.py":
RuntimeError: ERROR 999998: Unexpected Error.
That was try #8 of 20 for this core area.
Restarting iteration in 5 minutes.
---------------------------------
 
---------------------------------
Target core areas for core area #9 = [  1   2   3   4   5   6   7   8  10  11  12  13  14  15  16  17  18  19
  20  21  22  23  24  25  26  27  28  29  30  31  32  33  34  35  36  37
  38  39  40  41  42  43  44  45  46  47  48  49  50  51  52  53  54  55
  56  57  58  59  60  61  62  63  64  65  66  67  68  69  70  71  72  73
  74  75  76  77  78  79  80  81  82  83  84  85  86  87  88  89  90  91
  92  93  94  95  96  97  98  99 100 101 102 103 104 105 106 107 108 109
 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127
 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145
 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163
 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 179 180 181
 182 183 184 185 186 187 188 189 190 191 192 193 194 195 196 197 198 199
 200 201 202 203 204 205 206 207 208 209 210 211 212 213 214 215 216 217
 218 219 220 221 222 223 224 225 226 227 228 229 230 231 232 233 234 235
 236 237 238 239 240 241 242 243 244 245 246 247 248 249 250 251 252 253
 254 255 256 257 258 259 260 261 262 263 264 265 266 267 268 269 270 271
 272 273 274 275 276 277 278 279 280 281 282 283 284 285 286 287 288 289
 290 291 292 293 294 295 296 297 298 299 300 301 302 303 304 305 306 307
 308 309 310 311 312 313 314 315 316 317 318 319 320 321 322 323 324 325
 326 327 328 329 330 331 332 333 334 335 336 337 338 339 340 341 342 343
 344 345 346 347 348 349 350 351 352 353 354 355 356 357 358 359 360 361
 362 363 364 365 366 367 368 369 370 371 372 373 374 375 376 377 378 379
 380 381 382 383 384 385 386 387 388 389 390 391 392 393 394 395 396 397
 398 399 400 401 402 403 404 405 406 407 408 409 410 411 412 413 414 415
 416 417 418 419 420 421 422 423 424 425 426 427 428 429 430 431 432 433
 434 435 436 437 438 439 440 441 442 443 444 445]
 
---------------------------------
***Problem encountered executing statement:
"conRaster = Con(Raster(cfg.CORERAS) == int(sourceCore), 1);conRaster.save(SRCRASTER)"
The following error is being reported at line 553 of "D:\OneDrive\Programas\Linkage_Mapper_2_0_0\toolbox\scripts\s3_calcCwds.py":
RuntimeError: ERROR 999998: Unexpected Error.
That was try #9 of 20 for this core area.
Restarting iteration in 5 minutes.
---------------------------------
 
---------------------------------
Target core areas for core area #9 = [  1   2   3   4   5   6   7   8  10  11  12  13  14  15  16  17  18  19
  20  21  22  23  24  25  26  27  28  29  30  31  32  33  34  35  36  37
  38  39  40  41  42  43  44  45  46  47  48  49  50  51  52  53  54  55
  56  57  58  59  60  61  62  63  64  65  66  67  68  69  70  71  72  73
  74  75  76  77  78  79  80  81  82  83  84  85  86  87  88  89  90  91
  92  93  94  95  96  97  98  99 100 101 102 103 104 105 106 107 108 109
 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127
 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145
 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163
 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 179 180 181
 182 183 184 185 186 187 188 189 190 191 192 193 194 195 196 197 198 199
 200 201 202 203 204 205 206 207 208 209 210 211 212 213 214 215 216 217
 218 219 220 221 222 223 224 225 226 227 228 229 230 231 232 233 234 235
 236 237 238 239 240 241 242 243 244 245 246 247 248 249 250 251 252 253
 254 255 256 257 258 259 260 261 262 263 264 265 266 267 268 269 270 271
 272 273 274 275 276 277 278 279 280 281 282 283 284 285 286 287 288 289
 290 291 292 293 294 295 296 297 298 299 300 301 302 303 304 305 306 307
 308 309 310 311 312 313 314 315 316 317 318 319 320 321 322 323 324 325
 326 327 328 329 330 331 332 333 334 335 336 337 338 339 340 341 342 343
 344 345 346 347 348 349 350 351 352 353 354 355 356 357 358 359 360 361
 362 363 364 365 366 367 368 369 370 371 372 373 374 375 376 377 378 379
 380 381 382 383 384 385 386 387 388 389 390 391 392 393 394 395 396 397
 398 399 400 401 402 403 404 405 406 407 408 409 410 411 412 413 414 415
 416 417 418 419 420 421 422 423 424 425 426 427 428 429 430 431 432 433
 434 435 436 437 438 439 440 441 442 443 444 445]
 
---------------------------------
***Problem encountered executing statement:
"conRaster = Con(Raster(cfg.CORERAS) == int(sourceCore), 1);conRaster.save(SRCRASTER)"
The following error is being reported at line 553 of "D:\OneDrive\Programas\Linkage_Mapper_2_0_0\toolbox\scripts\s3_calcCwds.py":
RuntimeError: ERROR 999998: Unexpected Error.
That was try #10 of 20 for this core area.
Restarting iteration in 5 minutes.
---------------------------------
 
---------------------------------
Target core areas for core area #9 = [  1   2   3   4   5   6   7   8  10  11  12  13  14  15  16  17  18  19
  20  21  22  23  24  25  26  27  28  29  30  31  32  33  34  35  36  37
  38  39  40  41  42  43  44  45  46  47  48  49  50  51  52  53  54  55
  56  57  58  59  60  61  62  63  64  65  66  67  68  69  70  71  72  73
  74  75  76  77  78  79  80  81  82  83  84  85  86  87  88  89  90  91
  92  93  94  95  96  97  98  99 100 101 102 103 104 105 106 107 108 109
 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127
 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145
 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163
 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 179 180 181
 182 183 184 185 186 187 188 189 190 191 192 193 194 195 196 197 198 199
 200 201 202 203 204 205 206 207 208 209 210 211 212 213 214 215 216 217
 218 219 220 221 222 223 224 225 226 227 228 229 230 231 232 233 234 235
 236 237 238 239 240 241 242 243 244 245 246 247 248 249 250 251 252 253
 254 255 256 257 258 259 260 261 262 263 264 265 266 267 268 269 270 271
 272 273 274 275 276 277 278 279 280 281 282 283 284 285 286 287 288 289
 290 291 292 293 294 295 296 297 298 299 300 301 302 303 304 305 306 307
 308 309 310 311 312 313 314 315 316 317 318 319 320 321 322 323 324 325
 326 327 328 329 330 331 332 333 334 335 336 337 338 339 340 341 342 343
 344 345 346 347 348 349 350 351 352 353 354 355 356 357 358 359 360 361
 362 363 364 365 366 367 368 369 370 371 372 373 374 375 376 377 378 379
 380 381 382 383 384 385 386 387 388 389 390 391 392 393 394 395 396 397
 398 399 400 401 402 403 404 405 406 407 408 409 410 411 412 413 414 415
 416 417 418 419 420 421 422 423 424 425 426 427 428 429 430 431 432 433
 434 435 436 437 438 439 440 441 442 443 444 445]
 
---------------------------------
***Problem encountered executing statement:
"conRaster = Con(Raster(cfg.CORERAS) == int(sourceCore), 1);conRaster.save(SRCRASTER)"
The following error is being reported at line 553 of "D:\OneDrive\Programas\Linkage_Mapper_2_0_0\toolbox\scripts\s3_calcCwds.py":
RuntimeError: ERROR 999998: Unexpected Error.
That was try #11 of 20 for this core area.
Restarting iteration in 5 minutes.
---------------------------------
 
---------------------------------
Target core areas for core area #9 = [  1   2   3   4   5   6   7   8  10  11  12  13  14  15  16  17  18  19
  20  21  22  23  24  25  26  27  28  29  30  31  32  33  34  35  36  37
  38  39  40  41  42  43  44  45  46  47  48  49  50  51  52  53  54  55
  56  57  58  59  60  61  62  63  64  65  66  67  68  69  70  71  72  73
  74  75  76  77  78  79  80  81  82  83  84  85  86  87  88  89  90  91
  92  93  94  95  96  97  98  99 100 101 102 103 104 105 106 107 108 109
 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127
 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145
 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163
 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 179 180 181
 182 183 184 185 186 187 188 189 190 191 192 193 194 195 196 197 198 199
 200 201 202 203 204 205 206 207 208 209 210 211 212 213 214 215 216 217
 218 219 220 221 222 223 224 225 226 227 228 229 230 231 232 233 234 235
 236 237 238 239 240 241 242 243 244 245 246 247 248 249 250 251 252 253
 254 255 256 257 258 259 260 261 262 263 264 265 266 267 268 269 270 271
 272 273 274 275 276 277 278 279 280 281 282 283 284 285 286 287 288 289
 290 291 292 293 294 295 296 297 298 299 300 301 302 303 304 305 306 307
 308 309 310 311 312 313 314 315 316 317 318 319 320 321 322 323 324 325
 326 327 328 329 330 331 332 333 334 335 336 337 338 339 340 341 342 343
 344 345 346 347 348 349 350 351 352 353 354 355 356 357 358 359 360 361
 362 363 364 365 366 367 368 369 370 371 372 373 374 375 376 377 378 379
 380 381 382 383 384 385 386 387 388 389 390 391 392 393 394 395 396 397
 398 399 400 401 402 403 404 405 406 407 408 409 410 411 412 413 414 415
 416 417 418 419 420 421 422 423 424 425 426 427 428 429 430 431 432 433
 434 435 436 437 438 439 440 441 442 443 444 445]
 
---------------------------------
***Problem encountered executing statement:
"conRaster = Con(Raster(cfg.CORERAS) == int(sourceCore), 1);conRaster.save(SRCRASTER)"
The following error is being reported at line 553 of "D:\OneDrive\Programas\Linkage_Mapper_2_0_0\toolbox\scripts\s3_calcCwds.py":
RuntimeError: ERROR 999998: Unexpected Error.
That was try #12 of 20 for this core area.
Restarting iteration in 5 minutes.
---------------------------------
 
---------------------------------
Target core areas for core area #9 = [  1   2   3   4   5   6   7   8  10  11  12  13  14  15  16  17  18  19
  20  21  22  23  24  25  26  27  28  29  30  31  32  33  34  35  36  37
  38  39  40  41  42  43  44  45  46  47  48  49  50  51  52  53  54  55
  56  57  58  59  60  61  62  63  64  65  66  67  68  69  70  71  72  73
  74  75  76  77  78  79  80  81  82  83  84  85  86  87  88  89  90  91
  92  93  94  95  96  97  98  99 100 101 102 103 104 105 106 107 108 109
 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127
 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145
 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163
 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 179 180 181
 182 183 184 185 186 187 188 189 190 191 192 193 194 195 196 197 198 199
 200 201 202 203 204 205 206 207 208 209 210 211 212 213 214 215 216 217
 218 219 220 221 222 223 224 225 226 227 228 229 230 231 232 233 234 235
 236 237 238 239 240 241 242 243 244 245 246 247 248 249 250 251 252 253
 254 255 256 257 258 259 260 261 262 263 264 265 266 267 268 269 270 271
 272 273 274 275 276 277 278 279 280 281 282 283 284 285 286 287 288 289
 290 291 292 293 294 295 296 297 298 299 300 301 302 303 304 305 306 307
 308 309 310 311 312 313 314 315 316 317 318 319 320 321 322 323 324 325
 326 327 328 329 330 331 332 333 334 335 336 337 338 339 340 341 342 343
 344 345 346 347 348 349 350 351 352 353 354 355 356 357 358 359 360 361
 362 363 364 365 366 367 368 369 370 371 372 373 374 375 376 377 378 379
 380 381 382 383 384 385 386 387 388 389 390 391 392 393 394 395 396 397
 398 399 400 401 402 403 404 405 406 407 408 409 410 411 412 413 414 415
 416 417 418 419 420 421 422 423 424 425 426 427 428 429 430 431 432 433
 434 435 436 437 438 439 440 441 442 443 444 445]
 
---------------------------------
***Problem encountered executing statement:
"conRaster = Con(Raster(cfg.CORERAS) == int(sourceCore), 1);conRaster.save(SRCRASTER)"
The following error is being reported at line 553 of "D:\OneDrive\Programas\Linkage_Mapper_2_0_0\toolbox\scripts\s3_calcCwds.py":
RuntimeError: ERROR 999998: Unexpected Error.
That was try #13 of 20 for this core area.
Restarting iteration in 5 minutes.
---------------------------------
 
---------------------------------
Target core areas for core area #9 = [  1   2   3   4   5   6   7   8  10  11  12  13  14  15  16  17  18  19
  20  21  22  23  24  25  26  27  28  29  30  31  32  33  34  35  36  37
  38  39  40  41  42  43  44  45  46  47  48  49  50  51  52  53  54  55
  56  57  58  59  60  61  62  63  64  65  66  67  68  69  70  71  72  73
  74  75  76  77  78  79  80  81  82  83  84  85  86  87  88  89  90  91
  92  93  94  95  96  97  98  99 100 101 102 103 104 105 106 107 108 109
 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127
 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145
 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163
 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 179 180 181
 182 183 184 185 186 187 188 189 190 191 192 193 194 195 196 197 198 199
 200 201 202 203 204 205 206 207 208 209 210 211 212 213 214 215 216 217
 218 219 220 221 222 223 224 225 226 227 228 229 230 231 232 233 234 235
 236 237 238 239 240 241 242 243 244 245 246 247 248 249 250 251 252 253
 254 255 256 257 258 259 260 261 262 263 264 265 266 267 268 269 270 271
 272 273 274 275 276 277 278 279 280 281 282 283 284 285 286 287 288 289
 290 291 292 293 294 295 296 297 298 299 300 301 302 303 304 305 306 307
 308 309 310 311 312 313 314 315 316 317 318 319 320 321 322 323 324 325
 326 327 328 329 330 331 332 333 334 335 336 337 338 339 340 341 342 343
 344 345 346 347 348 349 350 351 352 353 354 355 356 357 358 359 360 361
 362 363 364 365 366 367 368 369 370 371 372 373 374 375 376 377 378 379
 380 381 382 383 384 385 386 387 388 389 390 391 392 393 394 395 396 397
 398 399 400 401 402 403 404 405 406 407 408 409 410 411 412 413 414 415
 416 417 418 419 420 421 422 423 424 425 426 427 428 429 430 431 432 433
 434 435 436 437 438 439 440 441 442 443 444 445]
 
---------------------------------
***Problem encountered executing statement:
"conRaster = Con(Raster(cfg.CORERAS) == int(sourceCore), 1);conRaster.save(SRCRASTER)"
The following error is being reported at line 553 of "D:\OneDrive\Programas\Linkage_Mapper_2_0_0\toolbox\scripts\s3_calcCwds.py":
RuntimeError: ERROR 999998: Unexpected Error.
That was try #14 of 20 for this core area.
Restarting iteration in 5 minutes.
---------------------------------
 
---------------------------------
Target core areas for core area #9 = [  1   2   3   4   5   6   7   8  10  11  12  13  14  15  16  17  18  19
  20  21  22  23  24  25  26  27  28  29  30  31  32  33  34  35  36  37
  38  39  40  41  42  43  44  45  46  47  48  49  50  51  52  53  54  55
  56  57  58  59  60  61  62  63  64  65  66  67  68  69  70  71  72  73
  74  75  76  77  78  79  80  81  82  83  84  85  86  87  88  89  90  91
  92  93  94  95  96  97  98  99 100 101 102 103 104 105 106 107 108 109
 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127
 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145
 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163
 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 179 180 181
 182 183 184 185 186 187 188 189 190 191 192 193 194 195 196 197 198 199
 200 201 202 203 204 205 206 207 208 209 210 211 212 213 214 215 216 217
 218 219 220 221 222 223 224 225 226 227 228 229 230 231 232 233 234 235
 236 237 238 239 240 241 242 243 244 245 246 247 248 249 250 251 252 253
 254 255 256 257 258 259 260 261 262 263 264 265 266 267 268 269 270 271
 272 273 274 275 276 277 278 279 280 281 282 283 284 285 286 287 288 289
 290 291 292 293 294 295 296 297 298 299 300 301 302 303 304 305 306 307
 308 309 310 311 312 313 314 315 316 317 318 319 320 321 322 323 324 325
 326 327 328 329 330 331 332 333 334 335 336 337 338 339 340 341 342 343
 344 345 346 347 348 349 350 351 352 353 354 355 356 357 358 359 360 361
 362 363 364 365 366 367 368 369 370 371 372 373 374 375 376 377 378 379
 380 381 382 383 384 385 386 387 388 389 390 391 392 393 394 395 396 397
 398 399 400 401 402 403 404 405 406 407 408 409 410 411 412 413 414 415
 416 417 418 419 420 421 422 423 424 425 426 427 428 429 430 431 432 433
 434 435 436 437 438 439 440 441 442 443 444 445]
 
---------------------------------
***Problem encountered executing statement:
"conRaster = Con(Raster(cfg.CORERAS) == int(sourceCore), 1);conRaster.save(SRCRASTER)"
The following error is being reported at line 553 of "D:\OneDrive\Programas\Linkage_Mapper_2_0_0\toolbox\scripts\s3_calcCwds.py":
RuntimeError: ERROR 999998: Unexpected Error.
That was try #15 of 20 for this core area.
Restarting iteration in 5 minutes.
---------------------------------
 
---------------------------------
Target core areas for core area #9 = [  1   2   3   4   5   6   7   8  10  11  12  13  14  15  16  17  18  19
  20  21  22  23  24  25  26  27  28  29  30  31  32  33  34  35  36  37
  38  39  40  41  42  43  44  45  46  47  48  49  50  51  52  53  54  55
  56  57  58  59  60  61  62  63  64  65  66  67  68  69  70  71  72  73
  74  75  76  77  78  79  80  81  82  83  84  85  86  87  88  89  90  91
  92  93  94  95  96  97  98  99 100 101 102 103 104 105 106 107 108 109
 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127
 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145
 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163
 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 179 180 181
 182 183 184 185 186 187 188 189 190 191 192 193 194 195 196 197 198 199
 200 201 202 203 204 205 206 207 208 209 210 211 212 213 214 215 216 217
 218 219 220 221 222 223 224 225 226 227 228 229 230 231 232 233 234 235
 236 237 238 239 240 241 242 243 244 245 246 247 248 249 250 251 252 253
 254 255 256 257 258 259 260 261 262 263 264 265 266 267 268 269 270 271
 272 273 274 275 276 277 278 279 280 281 282 283 284 285 286 287 288 289
 290 291 292 293 294 295 296 297 298 299 300 301 302 303 304 305 306 307
 308 309 310 311 312 313 314 315 316 317 318 319 320 321 322 323 324 325
 326 327 328 329 330 331 332 333 334 335 336 337 338 339 340 341 342 343
 344 345 346 347 348 349 350 351 352 353 354 355 356 357 358 359 360 361
 362 363 364 365 366 367 368 369 370 371 372 373 374 375 376 377 378 379
 380 381 382 383 384 385 386 387 388 389 390 391 392 393 394 395 396 397
 398 399 400 401 402 403 404 405 406 407 408 409 410 411 412 413 414 415
 416 417 418 419 420 421 422 423 424 425 426 427 428 429 430 431 432 433
 434 435 436 437 438 439 440 441 442 443 444 445]
 
---------------------------------
***Problem encountered executing statement:
"conRaster = Con(Raster(cfg.CORERAS) == int(sourceCore), 1);conRaster.save(SRCRASTER)"
The following error is being reported at line 553 of "D:\OneDrive\Programas\Linkage_Mapper_2_0_0\toolbox\scripts\s3_calcCwds.py":
RuntimeError: ERROR 999998: Unexpected Error.
That was try #16 of 20 for this core area.
Restarting iteration in 5 minutes.
---------------------------------
 
---------------------------------
Target core areas for core area #9 = [  1   2   3   4   5   6   7   8  10  11  12  13  14  15  16  17  18  19
  20  21  22  23  24  25  26  27  28  29  30  31  32  33  34  35  36  37
  38  39  40  41  42  43  44  45  46  47  48  49  50  51  52  53  54  55
  56  57  58  59  60  61  62  63  64  65  66  67  68  69  70  71  72  73
  74  75  76  77  78  79  80  81  82  83  84  85  86  87  88  89  90  91
  92  93  94  95  96  97  98  99 100 101 102 103 104 105 106 107 108 109
 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127
 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145
 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163
 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 179 180 181
 182 183 184 185 186 187 188 189 190 191 192 193 194 195 196 197 198 199
 200 201 202 203 204 205 206 207 208 209 210 211 212 213 214 215 216 217
 218 219 220 221 222 223 224 225 226 227 228 229 230 231 232 233 234 235
 236 237 238 239 240 241 242 243 244 245 246 247 248 249 250 251 252 253
 254 255 256 257 258 259 260 261 262 263 264 265 266 267 268 269 270 271
 272 273 274 275 276 277 278 279 280 281 282 283 284 285 286 287 288 289
 290 291 292 293 294 295 296 297 298 299 300 301 302 303 304 305 306 307
 308 309 310 311 312 313 314 315 316 317 318 319 320 321 322 323 324 325
 326 327 328 329 330 331 332 333 334 335 336 337 338 339 340 341 342 343
 344 345 346 347 348 349 350 351 352 353 354 355 356 357 358 359 360 361
 362 363 364 365 366 367 368 369 370 371 372 373 374 375 376 377 378 379
 380 381 382 383 384 385 386 387 388 389 390 391 392 393 394 395 396 397
 398 399 400 401 402 403 404 405 406 407 408 409 410 411 412 413 414 415
 416 417 418 419 420 421 422 423 424 425 426 427 428 429 430 431 432 433
 434 435 436 437 438 439 440 441 442 443 444 445]
 
---------------------------------
***Problem encountered executing statement:
"conRaster = Con(Raster(cfg.CORERAS) == int(sourceCore), 1);conRaster.save(SRCRASTER)"
The following error is being reported at line 553 of "D:\OneDrive\Programas\Linkage_Mapper_2_0_0\toolbox\scripts\s3_calcCwds.py":
RuntimeError: ERROR 999998: Unexpected Error.
That was try #17 of 20 for this core area.
Restarting iteration in 5 minutes.
---------------------------------
 
---------------------------------
Target core areas for core area #9 = [  1   2   3   4   5   6   7   8  10  11  12  13  14  15  16  17  18  19
  20  21  22  23  24  25  26  27  28  29  30  31  32  33  34  35  36  37
  38  39  40  41  42  43  44  45  46  47  48  49  50  51  52  53  54  55
  56  57  58  59  60  61  62  63  64  65  66  67  68  69  70  71  72  73
  74  75  76  77  78  79  80  81  82  83  84  85  86  87  88  89  90  91
  92  93  94  95  96  97  98  99 100 101 102 103 104 105 106 107 108 109
 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127
 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145
 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163
 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 179 180 181
 182 183 184 185 186 187 188 189 190 191 192 193 194 195 196 197 198 199
 200 201 202 203 204 205 206 207 208 209 210 211 212 213 214 215 216 217
 218 219 220 221 222 223 224 225 226 227 228 229 230 231 232 233 234 235
 236 237 238 239 240 241 242 243 244 245 246 247 248 249 250 251 252 253
 254 255 256 257 258 259 260 261 262 263 264 265 266 267 268 269 270 271
 272 273 274 275 276 277 278 279 280 281 282 283 284 285 286 287 288 289
 290 291 292 293 294 295 296 297 298 299 300 301 302 303 304 305 306 307
 308 309 310 311 312 313 314 315 316 317 318 319 320 321 322 323 324 325
 326 327 328 329 330 331 332 333 334 335 336 337 338 339 340 341 342 343
 344 345 346 347 348 349 350 351 352 353 354 355 356 357 358 359 360 361
 362 363 364 365 366 367 368 369 370 371 372 373 374 375 376 377 378 379
 380 381 382 383 384 385 386 387 388 389 390 391 392 393 394 395 396 397
 398 399 400 401 402 403 404 405 406 407 408 409 410 411 412 413 414 415
 416 417 418 419 420 421 422 423 424 425 426 427 428 429 430 431 432 433
 434 435 436 437 438 439 440 441 442 443 444 445]
 
---------------------------------
***Problem encountered executing statement:
"conRaster = Con(Raster(cfg.CORERAS) == int(sourceCore), 1);conRaster.save(SRCRASTER)"
The following error is being reported at line 553 of "D:\OneDrive\Programas\Linkage_Mapper_2_0_0\toolbox\scripts\s3_calcCwds.py":
RuntimeError: ERROR 999998: Unexpected Error.
That was try #18 of 20 for this core area.
Restarting iteration in 5 minutes.
---------------------------------
 
---------------------------------
Target core areas for core area #9 = [  1   2   3   4   5   6   7   8  10  11  12  13  14  15  16  17  18  19
  20  21  22  23  24  25  26  27  28  29  30  31  32  33  34  35  36  37
  38  39  40  41  42  43  44  45  46  47  48  49  50  51  52  53  54  55
  56  57  58  59  60  61  62  63  64  65  66  67  68  69  70  71  72  73
  74  75  76  77  78  79  80  81  82  83  84  85  86  87  88  89  90  91
  92  93  94  95  96  97  98  99 100 101 102 103 104 105 106 107 108 109
 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127
 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145
 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163
 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 179 180 181
 182 183 184 185 186 187 188 189 190 191 192 193 194 195 196 197 198 199
 200 201 202 203 204 205 206 207 208 209 210 211 212 213 214 215 216 217
 218 219 220 221 222 223 224 225 226 227 228 229 230 231 232 233 234 235
 236 237 238 239 240 241 242 243 244 245 246 247 248 249 250 251 252 253
 254 255 256 257 258 259 260 261 262 263 264 265 266 267 268 269 270 271
 272 273 274 275 276 277 278 279 280 281 282 283 284 285 286 287 288 289
 290 291 292 293 294 295 296 297 298 299 300 301 302 303 304 305 306 307
 308 309 310 311 312 313 314 315 316 317 318 319 320 321 322 323 324 325
 326 327 328 329 330 331 332 333 334 335 336 337 338 339 340 341 342 343
 344 345 346 347 348 349 350 351 352 353 354 355 356 357 358 359 360 361
 362 363 364 365 366 367 368 369 370 371 372 373 374 375 376 377 378 379
 380 381 382 383 384 385 386 387 388 389 390 391 392 393 394 395 396 397
 398 399 400 401 402 403 404 405 406 407 408 409 410 411 412 413 414 415
 416 417 418 419 420 421 422 423 424 425 426 427 428 429 430 431 432 433
 434 435 436 437 438 439 440 441 442 443 444 445]
 
---------------------------------
***Problem encountered executing statement:
"conRaster = Con(Raster(cfg.CORERAS) == int(sourceCore), 1);conRaster.save(SRCRASTER)"
The following error is being reported at line 553 of "D:\OneDrive\Programas\Linkage_Mapper_2_0_0\toolbox\scripts\s3_calcCwds.py":
RuntimeError: ERROR 999998: Unexpected Error.
That was try #19 of 20 for this core area.
Restarting iteration in 5 minutes.
---------------------------------
 
---------------------------------
Target core areas for core area #9 = [  1   2   3   4   5   6   7   8  10  11  12  13  14  15  16  17  18  19
  20  21  22  23  24  25  26  27  28  29  30  31  32  33  34  35  36  37
  38  39  40  41  42  43  44  45  46  47  48  49  50  51  52  53  54  55
  56  57  58  59  60  61  62  63  64  65  66  67  68  69  70  71  72  73
  74  75  76  77  78  79  80  81  82  83  84  85  86  87  88  89  90  91
  92  93  94  95  96  97  98  99 100 101 102 103 104 105 106 107 108 109
 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127
 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145
 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163
 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 179 180 181
 182 183 184 185 186 187 188 189 190 191 192 193 194 195 196 197 198 199
 200 201 202 203 204 205 206 207 208 209 210 211 212 213 214 215 216 217
 218 219 220 221 222 223 224 225 226 227 228 229 230 231 232 233 234 235
 236 237 238 239 240 241 242 243 244 245 246 247 248 249 250 251 252 253
 254 255 256 257 258 259 260 261 262 263 264 265 266 267 268 269 270 271
 272 273 274 275 276 277 278 279 280 281 282 283 284 285 286 287 288 289
 290 291 292 293 294 295 296 297 298 299 300 301 302 303 304 305 306 307
 308 309 310 311 312 313 314 315 316 317 318 319 320 321 322 323 324 325
 326 327 328 329 330 331 332 333 334 335 336 337 338 339 340 341 342 343
 344 345 346 347 348 349 350 351 352 353 354 355 356 357 358 359 360 361
 362 363 364 365 366 367 368 369 370 371 372 373 374 375 376 377 378 379
 380 381 382 383 384 385 386 387 388 389 390 391 392 393 394 395 396 397
 398 399 400 401 402 403 404 405 406 407 408 409 410 411 412 413 414 415
 416 417 418 419 420 421 422 423 424 425 426 427 428 429 430 431 432 433
 434 435 436 437 438 439 440 441 442 443 444 445]
 
---------------------------------
***Problem encountered executing statement:
"conRaster = Con(Raster(cfg.CORERAS) == int(sourceCore), 1);conRaster.save(SRCRASTER)"
The following error is being reported at line 553 of "D:\OneDrive\Programas\Linkage_Mapper_2_0_0\toolbox\scripts\s3_calcCwds.py":
RuntimeError: ERROR 999998: Unexpected Error.
 
---------------------------------
---------------------------------
Python error on **line 559** of s3_calcCwds.py in Linkage Mapper Version 2.0.0:
RuntimeError: ERROR 999998: Unexpected Error.

Stop time:        Thu May 09 11:55:06 2019


 
---------------------------------
****Failed in step 3. Details follow.****
---------------------------------
Python error on **line 335** of s3_calcCwds.py in Linkage Mapper Version 2.0.0:
SystemExit: 1

Stop time:        Thu May 09 11:55:06 2019


---------------------------------
Python error on **line 179** of lm_master.py in Linkage Mapper Version 2.0.0:
SystemExit: 1

Stop time:        Thu May 09 11:55:06 2019


---------------------------------
A record of run settings and messages can be found in your log directory:
E:\ES_MAPEAMENTO\LinkageMapper\run_history\log
---------------------------------
 

Stop time:        Thu May 09 11:55:06 2019



John Gallo

unread,
May 9, 2019, 3:51:31 PM5/9/19
to linkage...@googlegroups.com
Hi Flavio,

Thank you for including the log file in the body of the message, that is very helpful. 

I have a suspicion about what might be going on.  I have a few minutes in a few hours I think to look more.  In the meantime, someone else might have a suggestion.  

To help us further, and if not a problem, please also send a screengrab of your settings window, especially the part that gives you the option to ignore linkages that pass through other cores, and the number of linkages allowed per core.

Additionally/alternatively, you can try ignoring linkages that pass through other cores if you are not already, and let us know if that performs differently. (and/or limit the number of linkages to 8, if you currently have unlimited).

Thanks,

John  

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--

John Gallo, Ph.D.
Senior Scientist

Conservation Biology Institute
136 SW Washington Avenue, Suite 202
Corvallis, OR 97333
Remote Office: Inglenook, CA
Phone: 707.962.9078
Twitter: @johnagallo

Flavio Gontijo

unread,
May 15, 2019, 7:57:01 AM5/15/19
to Linkage Mapper
 Hi John,

Thanks for your response. I tried to igore linkages that pass through other cores, but it did not worked, but the error message has changed for this one:

***Problem encountered executing statement:
"conRaster = Con(Raster(cfg.CORERAS) == int(sourceCore), 1);conRaster.save(SRCRASTER)"
The following error is being reported at line 553 of "D:\OneDrive\Programas\Linkage_Mapper_2_0_0\toolbox\scripts\s3_calcCwds.py":
RuntimeError: ERROR 999998: Unexpected Error.



Below is the screengrab of the settings window.


John Gallo

unread,
May 15, 2019, 12:37:00 PM5/15/19
to linkage...@googlegroups.com
Hello Flavio,

Try clicking the checkbox on for "Drop Corridors that Intersect Core Areas" and running again? 

My suspicion is that with such a large number of cores your computer is running out of memory, but that clicking that on will make for much, much lesss calculation in memory, and that it should work fine for your landscape.  

If that does not work, please send the full error message as an attachment or in the body of the e-mail.

Thanks,

John

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Flavio Gontijo

unread,
May 15, 2019, 4:59:24 PM5/15/19
to Linkage Mapper
Hy John, thanks. I used a lower number of Core areas and it run ok!

On the other hand I think I´m having issues with the resistance raster. Should it be from 1 to 10 or 1 to 100? And the 1 represents a low-cost right?

Thank you so much!

Flávio


Em quarta-feira, 15 de maio de 2019 13:37:00 UTC-3, John Gallo escreveu:
Hello Flavio,

Try clicking the checkbox on for "Drop Corridors that Intersect Core Areas" and running again? 

My suspicion is that with such a large number of cores your computer is running out of memory, but that clicking that on will make for much, much lesss calculation in memory, and that it should work fine for your landscape.  

If that does not work, please send the full error message as an attachment or in the body of the e-mail.

Thanks,

John

On Wed, May 15, 2019 at 4:57 AM Flavio Gontijo <biop...@gmail.com> wrote:
 Hi John,

Thanks for your response. I tried to igore linkages that pass through other cores, but it did not worked, but the error message has changed for this one:

***Problem encountered executing statement:
"conRaster = Con(Raster(cfg.CORERAS) == int(sourceCore), 1);conRaster.save(SRCRASTER)"
The following error is being reported at line 553 of "D:\OneDrive\Programas\Linkage_Mapper_2_0_0\toolbox\scripts\s3_calcCwds.py":
RuntimeError: ERROR 999998: Unexpected Error.



Below is the screengrab of the settings window.


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John Gallo

unread,
May 15, 2019, 6:21:38 PM5/15/19
to linkage...@googlegroups.com
Hi Flavio,

That is great to hear.  

As to your question, it is your choice what the range of resistance values is.  Brad recommended 1-1000 as better than 1-100, which is better than 1-10, and I agree, to allow for a wide variance between moving through pristine habitat (1) and through the worst habitat on your landscape, (1,000).  Note, Andrew Shirk recommends having 1 always be the minimum value, but having the max value depend on your landscape. So, some landscapes might have a max value of more or less than 1,000.

Thanks,

JOhn



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biop...@gmail.com

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Oct 29, 2020, 9:19:49 AM10/29/20
to Linkage Mapper
Hi John,

I had another issue on LM, an error as listed below. Even when I unckeck thee drop corridox box it's not working.

Also, I'm sending below the print from the screen.

Matriz01 is the resistance raster and core_analyst 100 is the core area shapefile. All of them on projection SIRGAS 2000/23s.






Executing: MapLinkages C:\LMcinco core_analyst_100 Core_ID matriz01.tif true true "Cost-Weighted & Euclidean" # true false false 4 Cost-Weighted true true true 200000 # # # # #
Start Time: Thu Oct 29 09:47:10 2020
Running script MapLinkages...
---------------------------------
A record of run settings and messages can be found in your log directory:
C:\LMcinco\run_history\log
---------------------------------
 

********************************************************
NOTE: Linkage Mapper tools often work best when run  from ArcCatalog instead of ArcMap. 


Linkage Mapper Version 2.0.0
on ArcGIS Desktop 10.6 Service Pack N/A
Setting data frame spatial reference to that of core area feature class.
 
---------------------------------
Starting at step 1.

Making temporary copy of resistance raster for this run.

Making temporary raster of core file for this run.
 
---------------------------------
Running script s1_getAdjacencies.py
Adjacency files will be written to C:\LMcinco\datapass\adj

Calculating cost-weighted distance adjacency
Starting cost-weighted distance allocation...
Processing cell size: 100
-------------------------------------------------
Failed to execute costAllocOut = CostAllocation(cfg.CORERAS, bResistance, cfg.TMAXCWDIST, cfg.CORERAS,"VALUE", outDistanceRaster);costAllocOut.save(alloc_ras) on try #1.

The following ArcGIS error is being reported on line line 187 of "E:\OneDrive\Programas\Linkage_Mapper_2_0_0\toolbox\scripts\s1_getAdjacencies.py":
ERROR 999999: Error executing function.
The data necessary to complete this operation is not yet available. 
No spatial reference exists.
Failed to execute (CostAllocation).


********************************************************
NOTE: Linkage Mapper tools often work best when run  from ArcCatalog instead of ArcMap. 

Will try again. 
---------TRYING AGAIN IN 20 SECONDS---------

-------------------------------------------------
Failed to execute costAllocOut = CostAllocation(cfg.CORERAS, bResistance, cfg.TMAXCWDIST, cfg.CORERAS,"VALUE", outDistanceRaster);costAllocOut.save(alloc_ras) on try #2.

The following ArcGIS error is being reported on line line 187 of "E:\OneDrive\Programas\Linkage_Mapper_2_0_0\toolbox\scripts\s1_getAdjacencies.py":
ERROR 999999: Error executing function.
The data necessary to complete this operation is not yet available. 
No spatial reference exists.
Failed to execute (CostAllocation).


********************************************************
NOTE: Linkage Mapper tools often work best when run  from ArcCatalog instead of ArcMap. 

Will try again. 
---------TRYING AGAIN IN 40 SECONDS---------

-------------------------------------------------
Failed to execute costAllocOut = CostAllocation(cfg.CORERAS, bResistance, cfg.TMAXCWDIST, cfg.CORERAS,"VALUE", outDistanceRaster);costAllocOut.save(alloc_ras) on try #3.

The following ArcGIS error is being reported on line line 187 of "E:\OneDrive\Programas\Linkage_Mapper_2_0_0\toolbox\scripts\s1_getAdjacencies.py":
ERROR 999999: Error executing function.
The data necessary to complete this operation is not yet available. 
No spatial reference exists.
Failed to execute (CostAllocation).


********************************************************
NOTE: Linkage Mapper tools often work best when run  from ArcCatalog instead of ArcMap. 

Will try again. 
---------TRYING AGAIN IN 60 SECONDS---------

-------------------------------------------------
Failed to execute costAllocOut = CostAllocation(cfg.CORERAS, bResistance, cfg.TMAXCWDIST, cfg.CORERAS,"VALUE", outDistanceRaster);costAllocOut.save(alloc_ras) on try #4.

The following ArcGIS error is being reported on line line 187 of "E:\OneDrive\Programas\Linkage_Mapper_2_0_0\toolbox\scripts\s1_getAdjacencies.py":
ERROR 999999: Error executing function.
The data necessary to complete this operation is not yet available. 
No spatial reference exists.
Failed to execute (CostAllocation).


********************************************************
NOTE: Linkage Mapper tools often work best when run  from ArcCatalog instead of ArcMap. 

Will try again. 
---------TRYING AGAIN IN 80 SECONDS---------

-------------------------------------------------
Failed to execute costAllocOut = CostAllocation(cfg.CORERAS, bResistance, cfg.TMAXCWDIST, cfg.CORERAS,"VALUE", outDistanceRaster);costAllocOut.save(alloc_ras) on try #5.

The following ArcGIS error is being reported on line line 187 of "E:\OneDrive\Programas\Linkage_Mapper_2_0_0\toolbox\scripts\s1_getAdjacencies.py":
ERROR 999999: Error executing function.
The data necessary to complete this operation is not yet available. 
No spatial reference exists.
Failed to execute (CostAllocation).


********************************************************
NOTE: Linkage Mapper tools often work best when run  from ArcCatalog instead of ArcMap. 

Will try again. 
---------TRYING AGAIN IN 100 SECONDS---------

biop...@gmail.com

unread,
Oct 29, 2020, 10:25:26 AM10/29/20
to Linkage Mapper
Actually, this is the most recent error message:

Executing: MapLinkages C:\LMcinco core_analyst_100 Core_ID matriz02.tif true true "Cost-Weighted & Euclidean" # true false false 4 Cost-Weighted true true true 200000 # # # # #
Start Time: Thu Oct 29 11:18:38 2020
Running script MapLinkages...
---------------------------------
A record of run settings and messages can be found in your log directory:
C:\LMcinco\run_history\log
---------------------------------
 

********************************************************
NOTE: Linkage Mapper tools often work best when run  from ArcCatalog instead of ArcMap. 


Linkage Mapper Version 2.0.0
on ArcGIS Desktop 10.6 Service Pack N/A
Setting data frame spatial reference to that of core area feature class.
 
---------------------------------
Starting at step 1.

Making temporary copy of resistance raster for this run.

Making temporary raster of core file for this run.
 
---------------------------------
Running script s1_getAdjacencies.py
Adjacency files will be written to C:\LMcinco\datapass\adj

Calculating cost-weighted distance adjacency
Starting cost-weighted distance allocation...
Processing cell size: 100

Building output statistics and pyramids for CWD raster.
Cost-weighted distance allocation done.
That took 4 seconds.

Calculating adjacencies crossing allocation boundaries...
That took 3 seconds.

---------------------------------
Calculating Euclidean adjacency
Starting Euclidean adjacency processing...

Euclidean distance allocation done.
That took 0 seconds.

Calculating adjacencies crossing allocation boundaries...
That took 3 seconds.

 
---------------------------------
Running script s2_buildNetwork.py
Simplifying polygons for core pair distance calculations

Finding distances between cores using Generate Near Table.
There are 19 adjacent core pairs to process.
10 percent done
20 percent done
30 percent done
40 percent done
50 percent done
60 percent done
70 percent done
80 percent done
90 percent done
That took 7 seconds.

Distance file C:\LMcinco\core_analyst_100_dists.txt generated.

Core area distance list loaded.
number of pairwise distances = 19
 
---------------------------------
Removed 0 duplicate core pairs in Euclidean distance table.

After removing duplicates and distances that exceed maximum, 
there are 19 pairwise distances.  Max core ID number is 73.
Cost-weighted adjacency file loaded.
Creating link table

Keeping all adjacent links


Checking for corridors that are too long to map.
Writing C:\LMcinco\datapass\linkTable_s2.csv
There are 19 links in the table.
This includes 19 potential corridor links.
Creating shapefiles with linework for links.

Linework shapefiles written.
 
---------------------------------
Running script s3_calcCwds.py
---------------------------------
NOT using bounding circles in cost distance calculations.

Looking for C:\LMcinco\datapass\linkTable_s2.csv
There are 19 links in the table.
This includes 19 potential corridor links.

Number of core areas to connect: 12

Creating cost-weighted distance output folders
...cw

Checking for corridors that are too long to map.
Creating core area raster.

Starting cost distance calculations.

---------------------------------
Target core areas for core area #1 = [12 17 22 28 46 63 64 67 69 70]
Done with all calculations for core ID #1. 1 of 12 cores have been processed.
That took 46 seconds.

---------------------------------
Target core areas for core area #12 = [1]
Done with all calculations for core ID #12. 2 of 12 cores have been processed.
That took 6 seconds.

---------------------------------
Target core areas for core area #17 = [ 1 28]
Done with all calculations for core ID #17. 3 of 12 cores have been processed.
That took 10 seconds.

---------------------------------
Target core areas for core area #22 = [1]
Done with all calculations for core ID #22. 4 of 12 cores have been processed.
That took 7 seconds.

---------------------------------
Target core areas for core area #28 = [ 1 17]
Done with all calculations for core ID #28. 5 of 12 cores have been processed.
That took 7 seconds.

---------------------------------
Target core areas for core area #46 = [1]
Done with all calculations for core ID #46. 6 of 12 cores have been processed.
That took 7 seconds.

---------------------------------
Target core areas for core area #63 = [ 1 67]
Done with all calculations for core ID #63. 7 of 12 cores have been processed.
That took 11 seconds.

---------------------------------
Target core areas for core area #64 = [ 1 69 70 73]
Done with all calculations for core ID #64. 8 of 12 cores have been processed.
That took 19 seconds.

---------------------------------
Target core areas for core area #67 = [ 1 63 70 73]
Done with all calculations for core ID #67. 9 of 12 cores have been processed.
That took 14 seconds.

---------------------------------
Target core areas for core area #69 = [ 1 64 70]
Done with all calculations for core ID #69. 10 of 12 cores have been processed.
That took 10 seconds.

---------------------------------
Target core areas for core area #70 = [ 1 64 67 69 73]
 
---------------------------------
***Problem encountered executing statement:
"outCostDist = CostDistance(SRCRASTER, bResistance, cfg.TMAXCWDIST, back_rast);outCostDist.save(outDistanceRaster)"
The following ArcGIS error is being reported on line line 577 of "E:\OneDrive\Programas\Linkage_Mapper_2_0_0\toolbox\scripts\s3_calcCwds.py":
ERROR 999999: Error executing function.
Failed to write a pixel block. [Possibly out of disk space]
Failed to execute (CostDistance).


********************************************************
NOTE: Linkage Mapper tools often work best when run  from ArcCatalog instead of ArcMap. 

That was try #1 of 20 for this core area.
Restarting iteration in 10 seconds. 
---------------------------------
 
---------------------------------
Target core areas for core area #70 = [ 1 64 67 69 73]
 
---------------------------------
***Problem encountered executing statement:
"conRaster = Con(Raster(cfg.CORERAS) == int(sourceCore), 1);conRaster.save(SRCRASTER)"
The following error is being reported at line 553 of "E:\OneDrive\Programas\Linkage_Mapper_2_0_0\toolbox\scripts\s3_calcCwds.py":
RuntimeError: ERROR 999998: Unexpected Error.

That was try #2 of 20 for this core area.
Restarting iteration in 20 seconds. 
---------------------------------
 
---------------------------------
Target core areas for core area #70 = [ 1 64 67 69 73]
 
---------------------------------
***Problem encountered executing statement:
"conRaster = Con(Raster(cfg.CORERAS) == int(sourceCore), 1);conRaster.save(SRCRASTER)"
The following error is being reported at line 553 of "E:\OneDrive\Programas\Linkage_Mapper_2_0_0\toolbox\scripts\s3_calcCwds.py":
RuntimeError: ERROR 999998: Unexpected Error.

That was try #3 of 20 for this core area.
Restarting iteration in 30 seconds. 
---------------------------------
 
---------------------------------
Target core areas for core area #70 = [ 1 64 67 69 73]
 
---------------------------------
***Problem encountered executing statement:
"conRaster = Con(Raster(cfg.CORERAS) == int(sourceCore), 1);conRaster.save(SRCRASTER)"
The following error is being reported at line 553 of "E:\OneDrive\Programas\Linkage_Mapper_2_0_0\toolbox\scripts\s3_calcCwds.py":
RuntimeError: ERROR 999998: Unexpected Error.

That was try #4 of 20 for this core area.
Restarting iteration in 40 seconds. 
---------------------------------
 
---------------------------------
Target core areas for core area #70 = [ 1 64 67 69 73]
 
---------------------------------
***Problem encountered executing statement:
"conRaster = Con(Raster(cfg.CORERAS) == int(sourceCore), 1);conRaster.save(SRCRASTER)"
The following error is being reported at line 553 of "E:\OneDrive\Programas\Linkage_Mapper_2_0_0\toolbox\scripts\s3_calcCwds.py":
RuntimeError: ERROR 999998: Unexpected Error.

That was try #5 of 20 for this core area.
Restarting iteration in 50 seconds. 
---------------------------------
 
---------------------------------
Target core areas for core area #70 = [ 1 64 67 69 73]
 
---------------------------------
***Problem encountered executing statement:
"conRaster = Con(Raster(cfg.CORERAS) == int(sourceCore), 1);conRaster.save(SRCRASTER)"
The following error is being reported at line 553 of "E:\OneDrive\Programas\Linkage_Mapper_2_0_0\toolbox\scripts\s3_calcCwds.py":
RuntimeError: ERROR 999998: Unexpected Error.

That was try #6 of 20 for this core area.
Restarting iteration in 60 seconds. 
---------------------------------
 



John Gallo

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Oct 29, 2020, 7:44:05 PM10/29/20
to linkage...@googlegroups.com
Hello Biophocus,

First thing, it says 

"Failed to write a pixel block. [Possibly out of disk space]
Failed to execute (CostDistance)."

have you double checked the hard drive that this is writing to, to make sure there is disk space?

Thanks,

John


John Gallo, Ph.D.
Senior Scientist

Conservation Biology Institute
136 SW Washington Avenue, Suite 202
Corvallis, OR 97333
Remote Office: Inglenook, CA
Phone: 707.962.9078
Twitter: @johnagallo

biop...@gmail.com

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Oct 30, 2020, 7:57:06 AM10/30/20
to Linkage Mapper
Hi John, yes, I did and I've moved the project directory but did not worked.

Is there any limits for the number of core areas that LM can process? I tried to remove some of the core areas, and for a shorter number of core it worked just fine.

And also, my resistance matriz has a 100m pixel. Does that influence on processing? Could that be the reason of those problems? I thought about trying a 50m pixel raster of resistance.

Thanks a lot!

John Gallo

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Oct 31, 2020, 2:55:49 PM10/31/20
to linkage...@googlegroups.com
Hi Biophocus,

The limit on cores depends on the computer RAM etc and resolution of resistance etc, but is usually  500 to 2000 cores. You are fine with 19. 

The error may be when you copied and pasted from one drive to another to make space.  It probably won't work that way.  Try running the entire analysis, from the start, on the drive with adequate space.  If that does not work send that error log.

And make sure that the drive that haas ArcGIS loaded and used for processing also has space.

Thanks,

JOhn



John Gallo, Ph.D.
Senior Scientist

Conservation Biology Institute
136 SW Washington Avenue, Suite 202
Corvallis, OR 97333
Remote Office: Inglenook, CA
Phone: 707.962.9078
Twitter: @johnagallo

biop...@gmail.com

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Nov 5, 2020, 7:19:58 AM11/5/20
to Linkage Mapper
Hi John,

It did run ok for some of the projects i´ve been trying, but with this one (attached) it stops on core #152, with the same error message. All drives are clear and it is intriguing how for some projects it is running ok and for some not.

Thanks a lot!


abbase.rar

John Gallo

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Nov 18, 2020, 4:54:39 PM11/18/20
to Linkage Mapper
Hi Flavio,

That is great!  So glad that solved the problem for most of the projects.  Sounds to me like we have a differnt problem for the one that did not run.  The error message may seem the same though.  I won't know until I read the log file.  Then again, it could be that there is a file still in memory, and it is indeed the same problem.

I would try it again with the same inputs, but with a different name, in a newly created folder.  And please send the log file anytime you send an error report.

Thanks,

John

Darren

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Feb 26, 2021, 8:52:38 PM2/26/21
to Linkage Mapper
Hi Flavio,

Some late feedback! 

I tested your data on ArcGIS Desktop 10.8.1 with our development version of Linkage Mapper and I didn't encounter any errors.

Darren 

Ben Paterson

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Mar 11, 2021, 12:48:59 PM3/11/21
to Linkage Mapper
Hi Jon,

Im encountering the same issue. I have 20gb free on my laptop, is this enough space to carry out Linkage Mapper? Am using 20 core areas...

Thanks,

Ben Paterson

Darren

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Mar 17, 2021, 7:43:21 PM3/17/21
to Linkage Mapper
Hi Ben,

You should have adequate space but it ultimately depends on the size of your input data, particularly the resistance raster. If you wish to try out our current beta, you can download it here.

Darren
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